-
SpecieshumanProduct IDFXC00184Cloning SiteSgfI-PmeISymbolTTC7A
Alias : GIDID, MINAT, TTC7Descriptiontetratricopeptide repeat domain 7A
Length: 2217 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 739 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS74510.1 0 99.9 TTC7A CCDS33193.1 0 99.9 TTC7A CCDS74511.1 5e-173 96.5 TTC7A CCDS32140.1 9.6e-138 52.7 TTC7B
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR013105 628 658 PF07719 Tetratricopeptide TPR2 IPR001440 695 724 PF00515 Tetratricopeptide TPR-1 HMMSmart IPR019734 295 328 SM00028 Tetratricopeptide repeat IPR019734 368 412 SM00028 Tetratricopeptide repeat IPR019734 447 480 SM00028 Tetratricopeptide repeat IPR019734 592 625 SM00028 Tetratricopeptide repeat IPR019734 626 659 SM00028 Tetratricopeptide repeat IPR019734 660 693 SM00028 Tetratricopeptide repeat IPR019734 694 727 SM00028 Tetratricopeptide repeat ProfileScan IPR013026 261 328 PS50293 Tetratricopeptide repeat-containing IPR019734 295 328 PS50005 Tetratricopeptide repeat IPR013026 397 480 PS50293 Tetratricopeptide repeat-containing IPR019734 413 446 PS50005 Tetratricopeptide repeat IPR019734 447 480 PS50005 Tetratricopeptide repeat IPR019734 592 625 PS50005 Tetratricopeptide repeat IPR013026 592 727 PS50293 Tetratricopeptide repeat-containing IPR019734 626 659 PS50005 Tetratricopeptide repeat IPR019734 660 693 PS50005 Tetratricopeptide repeat IPR019734 694 727 PS50005 Tetratricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005264496 739 243150,609332 99.9 100.0 XP_011531300 739 243150,609332 99.9 100.0 XP_016860017 739 243150,609332 99.9 92.8 XP_016860016 770 243150,609332 99.9 92.8 XP_016860014 802 243150,609332 99.9 92.8 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KA1140 Download>KIAA1140 2217 bp ATGCCATCAGCATGTACGCACGGGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCC TGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGCATGCCTCCGGCTTCTTG GGGGAACACAGTCCCGGTGGTCAGAGGTCCTGCAGGGGAGGCCTCTCTCTGGAACGCCTA CCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAGTGATCACCTGT TTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGACCACAAAT AACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACTATGAGCTCACCTACTTC CTGGAAGCTGCCCTCCAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACATCGTGAAG GGCATGAGAGAGCTCCGGGAGGTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTC AAAGTGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGAGTGC TACTGGAGCCCCCTGTCCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTTC GCCACTCAGGCCCTGCGGAAACCTCACCTCTATGAAGGAGACAACCTCTACTGCCCCAAG GACAACATCGAGGAAGCCCTCCTGCTCCTCCTCATCAGCGAATCCATGGCAACTCGAGAT GTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGACAGTGAGCTTGCAGAATGCC GCAGCCATCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGGGACAGTACGTCATGCTC TCGGAGTGCCTGGAGCGAGCCATGAAGTTTGCGTTTGGAGAATTTCACCTTTGGTACCAG GTGGCCCTCTCCATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAG TGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATC GGGTCCCTTCGCTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGTGATCAGCCTCGGA GAGGAAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTCTGGGTCTCACCTATAGCCTG CAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAG ACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCG CTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGCTGCAGGAGGCCCTG AAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAG AAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAAC TTCAACCTGATCTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCC CTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTG GGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGC ATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGGCGGGCTTCGTCC ATCGCCGCCTCCCGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTG AAGCAGGGCCCCATGCAGCTGTGGACCACGCTGGAACAGATCTGGCTGCAGGCTGCTGAG CTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGC CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGC AACCTGGAGGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTG CGCATCATGCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAG AAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGGCCTG GGCGAGGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGTTGACTGCTTCCTCACCGCC CTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTC
Cloned ORF protein sequence for pF1KA1140 Download>KIAA1140 739 aa MPSACTHGPGLMTCPWRTSPCIRCGCCRRLLSSKHASGFLGEHSPGGQRSCRGGLSLERL PNSIASRFRLTEREEEVITCFERASWIAQVFLQELEKTTNNSTSRHLKGCHPLDYELTYF LEAALQSAYVKNLKKGNIVKGMRELREVLRTVETKATQNFKVMAAKHLAGVLLHSLSEEC YWSPLSHPLPEFMGKEESSFATQALRKPHLYEGDNLYCPKDNIEEALLLLLISESMATRD VVLSRVPEQEEDRTVSLQNAAAIYDLLSITLGRRGQYVMLSECLERAMKFAFGEFHLWYQ VALSMVACGKSAYAVSLLRECVKLRPSDPTVPLMAAKVCIGSLRWLEEAEHFAMMVISLG EEAGEFLPKGYLALGLTYSLQATDATLKSKQDELHRKALQTLERAQQLAPSDPQVILYVS LQLALVRQISSAMEQLQEALKVRKDDAHALHLLALLFSAQKHHQHALDVVNMAITEHPEN FNLIFTKVKLEQVLKGPEEALVTCRQVLRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQSG MHLTLPDAHDADSGSRRASSIAASRLEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAE LFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGV RIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTA LELEASSPVLPFSIIPREL
Nucleotide Sequence (with vector) for pF1KA1140 Download>pF1KA1140 5330 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCATCAGCA TGTACGCACGGGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGC GGCTGCTGTCGGAGGCTTTTGTCATCAAAGCATGCCTCCGGCTTCTTGGGGGAACACAGT CCCGGTGGTCAGAGGTCCTGCAGGGGAGGCCTCTCTCTGGAACGCCTACCCAACTCCATC GCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGGCC TCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGACCACAAATAACAGCACGTCG AGGCATCTGAAAGGCTGTCACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAGCTGCC CTCCAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACATCGTGAAGGGCATGAGAGAG CTCCGGGAGGTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGATGGCG GCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGAGTGCTACTGGAGCCCC CTGTCCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCC CTGCGGAAACCTCACCTCTATGAAGGAGACAACCTCTACTGCCCCAAGGACAACATCGAG GAAGCCCTCCTGCTCCTCCTCATCAGCGAATCCATGGCAACTCGAGATGTGGTGCTGAGC CGGGTGCCGGAGCAGGAGGAGGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCATCTAT GACCTCCTGAGCATCACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTG GAGCGAGCCATGAAGTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGTGGCCCTCTCC ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTG CGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGC TGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGG GAGTTCCTCCCCAAGGGCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGGCCACCGAC GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGG GCTCAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTGGCC CTCGTCCGACAGATCTCCAGTGCCATGGAGCAGCTGCAGGAGGCCCTGAAGGTACGCAAG GATGATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAG CATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCTGATC TTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGC AGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAA AAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACT TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCC CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCC ATGCAGCTGTGGACCACGCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTTCATGGAG CAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCCACT TCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGGAG GCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCAT AGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGT GATGCCGTGGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGTGCTG CAGGCCCAGGGCCAGAACGAGGCTGCCGTTGACTGCTTCCTCACCGCCCTTGAGCTGGAG GCCAGCAGCCCTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCGTTTAAACGAATTCG AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC GGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTA ACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTG AAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGC GGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAG CAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAA GAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGC CAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGC GCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTA CACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAG AAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCT TCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGA GCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGC GGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTT ATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATAC AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
more Linker info
