OR1L3 ORF clone FHC29399

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Halotag ORF Clone FHC29399

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Clone info.

Species

human

Clone Name

pFN21AE0892 Sequence (with vector) Restriction Map

Product ID

FHC29399

ORF Sequence

DNA sequence (972 bp)
Protein sequence (324 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE0892

Symbol

OR1L3

Alias : OR9-28, OR9-D

Description

olfactory receptor, family 1, subfamily L, member 3

Original Clone ID

cp01292

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 972 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 324 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35128.1 9.2e-102 100.0 OR1L3 CCDS35127.2 8.2e-77 78.1 OR1L1 CCDS35124.1 7.2e-65 68.4 OR1L8 CCDS35130.2 1.2e-63 67.9 OR1L6 CCDS35129.1 5.6e-63 67.1 OR1L4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 271 297 PR00237 GPCR IPR000725 282 293 PR00245 Olfactory receptor HMMPfam IPR000276 41 289 PF00001 GPCR ProfileScan IPR017452 41 289 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 28 FALFLIIYLVTLMGNLLIILAIH 50 PRIMARY 23 2 61 FFLSILSFADICYTTVIVPKMLV 83 SECONDARY 23 3 103 FFLVFGNIDSYLLAAMAINRCVA 125 PRIMARY 23 4 140 CCVLLLAFPITFSYFHSLLHVLL 162 PRIMARY 23 5 202 EGLASVMAPFVCIIISYLRILIA 224 PRIMARY 23 6 237 AFSTCSSHLTVVILFYGSISYVY 259 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 51.0 94.8 NP_036492 312 603232 51.0 94.8 XP_011520808 322 603232 51.0 94.8 NP_002539 312 164342 50.3 94.4 NP_006628 314 608496 49.2 94.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0892 Download

>KIEE0892  972 bp
ATGGGAATGTCCAACCTGACAAGACTCTCTGAATTTATTCTCTTGGGACTCTCCTCTCGG
TCTGAAGACCAGAGGCCACTCTTTGCCCTCTTTCTTATCATATACCTGGTCACTTTGATG
GGAAATCTGCTCATCATCTTGGCTATCCACTCTGATCCTCGACTTCAAAACCCTATGTAT
TTTTTCCTAAGCATCTTGTCCTTTGCTGATATTTGCTACACAACAGTCATAGTCCCAAAG
ATGCTCGTGAACTTCTTATCAGAGAAAAAGACCATTTCCTATGCTGAATGTCTGGCACAG
ATGTATTTCTTCCTGGTTTTTGGAAACATAGATAGTTATCTCCTGGCGGCTATGGCCATC
AACCGCTGTGTAGCCATTTGTAACCCATTCCATTATGTCACTGTTATGAACCGCAGATGC
TGTGTGTTGCTACTAGCATTCCCCATCACTTTCTCCTATTTCCACTCTCTCCTACATGTC
CTCCTGGTGAATCGGCTCACCTTTTGTACATCAAATGTTATCCATCATTTTTTTTGTGAT
GTCAACCCTGTGCTGAAACTGTCCTGCTCCTCCACCTTTGTCAATGAAATTGTGGCCATG
ACAGAAGGGCTGGCCTCTGTGATGGCTCCATTTGTCTGTATCATCATCTCTTATCTAAGA
ATTCTCATCGCTGTTCTCAAGATTCCCTCAGCAGCTGGAAAACACAAAGCCTTCTCCACC
TGCAGCTCCCATCTCACTGTGGTGATTCTGTTTTATGGGAGTATTAGCTATGTCTATTTG
CAGCCTTTGTCCAGCTATACTGTCAAGGACCGAATAGCAACAATCAACTACACTGTGTTG
ACATCAGTGTTGAACCCATTTATCTACAGTTTAAGAAACAAAGACATGAAACGGGGCTTA
CAGAAATTGATAAACAAGATTAAGTCTCAAATGAGTAGGTTCTCTACAAAGACCAATAAA
ATCTGTGGACCC

ORF Protein

Cloned ORF protein sequence for pFN21AE0892 Download

>KIEE0892  324 aa
MGMSNLTRLSEFILLGLSSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQNPMY
FFLSILSFADICYTTVIVPKMLVNFLSEKKTISYAECLAQMYFFLVFGNIDSYLLAAMAI
NRCVAICNPFHYVTVMNRRCCVLLLAFPITFSYFHSLLHVLLVNRLTFCTSNVIHHFFCD
VNPVLKLSCSSTFVNEIVAMTEGLASVMAPFVCIIISYLRILIAVLKIPSAAGKHKAFST
CSSHLTVVILFYGSISYVYLQPLSSYTVKDRIATINYTVLTSVLNPFIYSLRNKDMKRGL
QKLINKIKSQMSRFSTKTNKICGP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0892 Download

>pFN21AE0892  5677 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGAATGTCCAACCTGACAAGACTCTCTGAATT
TATTCTCTTGGGACTCTCCTCTCGGTCTGAAGACCAGAGGCCACTCTTTGCCCTCTTTCT
TATCATATACCTGGTCACTTTGATGGGAAATCTGCTCATCATCTTGGCTATCCACTCTGA
TCCTCGACTTCAAAACCCTATGTATTTTTTCCTAAGCATCTTGTCCTTTGCTGATATTTG
CTACACAACAGTCATAGTCCCAAAGATGCTCGTGAACTTCTTATCAGAGAAAAAGACCAT
TTCCTATGCTGAATGTCTGGCACAGATGTATTTCTTCCTGGTTTTTGGAAACATAGATAG
TTATCTCCTGGCGGCTATGGCCATCAACCGCTGTGTAGCCATTTGTAACCCATTCCATTA
TGTCACTGTTATGAACCGCAGATGCTGTGTGTTGCTACTAGCATTCCCCATCACTTTCTC
CTATTTCCACTCTCTCCTACATGTCCTCCTGGTGAATCGGCTCACCTTTTGTACATCAAA
TGTTATCCATCATTTTTTTTGTGATGTCAACCCTGTGCTGAAACTGTCCTGCTCCTCCAC
CTTTGTCAATGAAATTGTGGCCATGACAGAAGGGCTGGCCTCTGTGATGGCTCCATTTGT
CTGTATCATCATCTCTTATCTAAGAATTCTCATCGCTGTTCTCAAGATTCCCTCAGCAGC
TGGAAAACACAAAGCCTTCTCCACCTGCAGCTCCCATCTCACTGTGGTGATTCTGTTTTA
TGGGAGTATTAGCTATGTCTATTTGCAGCCTTTGTCCAGCTATACTGTCAAGGACCGAAT
AGCAACAATCAACTACACTGTGTTGACATCAGTGTTGAACCCATTTATCTACAGTTTAAG
AAACAAAGACATGAAACGGGGCTTACAGAAATTGATAAACAAGATTAAGTCTCAAATGAG
TAGGTTCTCTACAAAGACCAATAAAATCTGTGGACCCGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT