OR5D18 ORF clone FHC27986

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27986

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Clone info.

Species

human

Clone Name

pFN21AE5983 Sequence (with vector) Restriction Map

Product ID

FHC27986

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5983

Symbol

OR5D18

Alias : OR11-143

Description

olfactory receptor, family 5, subfamily D, member 18

Original Clone ID

cp95983

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31510.1 8.9e-96 99.4 OR5D18 CCDS31512.1 3e-77 80.1 OR5D16 CCDS31508.1 1.1e-67 71.1 OR5D14 CCDS31511.1 1.1e-56 62.3 OR5L2 CCDS7949.1 7.7e-54 57.6 OR5I1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 27 51 PR00237 GPCR IPR000276 60 81 PR00237 GPCR IPR000725 93 104 PR00245 Olfactory receptor IPR000276 105 127 PR00237 GPCR IPR000725 130 142 PR00245 Olfactory receptor IPR000725 177 193 PR00245 Olfactory receptor IPR000276 200 223 PR00237 GPCR IPR000725 237 246 PR00245 Olfactory receptor IPR000276 273 299 PR00237 GPCR IPR000725 284 295 PR00245 Olfactory receptor HMMPfam IPR000276 42 291 PF00001 GPCR ProfileScan IPR017452 42 291 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 31 VFLAIYNVTVLGNIGLIVIIKIN 53 PRIMARY 23 2 63 FLSQLSFVDFCYSSIIAPKMLVN 85 SECONDARY 23 3 102 FFFFCTFVVTESFLLAVMAYDRF 124 PRIMARY 23 4 142 CVLLVVGSYAWGVSCSLELTCSA 164 PRIMARY 23 5 203 LATFNEISTLLIVLTSYAFIVVT 225 PRIMARY 23 6 241 TCASHLTAITIFHGTILFLYCV 262 SECONDARY 22 7 271 TVKVASVFYTVVIPMLNPLIYSL 293 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 57.6 99.0 NP_001004729 311 615702 50.2 95.5 NP_003688 314 608492 50.0 98.1 XP_011520809 312 603232 47.2 97.4 NP_036492 312 603232 47.2 97.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5983 Download

>KIEE5983  939 bp
ATGCTGCTGACTGATAGAAATACAAGTGGGACCACGTTCACCCTCTTGGGCTTCTCAGAT
TACCCAGAACTGCAAGTCCCACTCTTCCTGGTTTTTCTGGCCATCTACAATGTCACTGTG
CTAGGGAATATTGGGTTGATTGTGATCATCAAAATCAACCCCAAACTGCATACCCCCATG
TACTTTTTCCTCAGCCAACTCTCCTTTGTGGATTTCTGCTATTCCTCCATCATTGCTCCC
AAGATGTTGGTGAACCTTGTTGTCAAAGACAGAACCATTTCATTTTTAGGATGCGTAGTA
CAATTCTTTTTCTTCTGTACCTTTGTGGTCACTGAATCCTTTTTATTAGCTGTGATGGCC
TATGACCGCTTCGTGGCCATTTGCAACCCTCTGCTCTACACAGTTGACATGTCCCAGAAA
CTCTGCGTGCTGCTGGTTGTGGGATCCTATGCCTGGGGAGTCTCATGTTCCTTGGAACTG
ACGTGCTCTGCTTTAAAGTTATGTTTTCATGGTTTCAACACAATCAATCACTTCTTCTGT
GAGTTCTCCTCACTACTCTCCCTTTCTTGCTCTGATACTTACATCAACCAGTGGCTGCTA
TTCTTTCTTGCCACCTTTAATGAAATCAGCACACTACTCATCGTTCTCACATCTTATGCG
TTCATTGTTGTAACCATCCTCAAGATGCGTTCAGTCAGTGGGCGCCGCAAAGCCTTCTCC
ACCTGTGCCTCCCACCTGACTGCCATCACCATCTTCCATGGCACCATCCTCTTCCTTTAC
TGTGTGCCCAACTCCAAAAACTCCAGGCGCACAGTCAAAGTGGCCTCTGTGTTTTACACC
GTGGTGATCCCCATGTTGAATCCCCTGATCTACAGTCTGAGAAATAAAGATGTCAAGGAT
ACAGTCACCGAGATACTGGACACCAAAGTCTTCTCTTAC

ORF Protein

Cloned ORF protein sequence for pFN21AE5983 Download

>KIEE5983  313 aa
MLLTDRNTSGTTFTLLGFSDYPELQVPLFLVFLAIYNVTVLGNIGLIVIIKINPKLHTPM
YFFLSQLSFVDFCYSSIIAPKMLVNLVVKDRTISFLGCVVQFFFFCTFVVTESFLLAVMA
YDRFVAICNPLLYTVDMSQKLCVLLVVGSYAWGVSCSLELTCSALKLCFHGFNTINHFFC
EFSSLLSLSCSDTYINQWLLFFLATFNEISTLLIVLTSYAFIVVTILKMRSVSGRRKAFS
TCASHLTAITIFHGTILFLYCVPNSKNSRRTVKVASVFYTVVIPMLNPLIYSLRNKDVKD
TVTEILDTKVFSY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5983 Download

>pFN21AE5983  5644 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGCTGACTGATAGAAATACAAGTGGGACCAC
GTTCACCCTCTTGGGCTTCTCAGATTACCCAGAACTGCAAGTCCCACTCTTCCTGGTTTT
TCTGGCCATCTACAATGTCACTGTGCTAGGGAATATTGGGTTGATTGTGATCATCAAAAT
CAACCCCAAACTGCATACCCCCATGTACTTTTTCCTCAGCCAACTCTCCTTTGTGGATTT
CTGCTATTCCTCCATCATTGCTCCCAAGATGTTGGTGAACCTTGTTGTCAAAGACAGAAC
CATTTCATTTTTAGGATGCGTAGTACAATTCTTTTTCTTCTGTACCTTTGTGGTCACTGA
ATCCTTTTTATTAGCTGTGATGGCCTATGACCGCTTCGTGGCCATTTGCAACCCTCTGCT
CTACACAGTTGACATGTCCCAGAAACTCTGCGTGCTGCTGGTTGTGGGATCCTATGCCTG
GGGAGTCTCATGTTCCTTGGAACTGACGTGCTCTGCTTTAAAGTTATGTTTTCATGGTTT
CAACACAATCAATCACTTCTTCTGTGAGTTCTCCTCACTACTCTCCCTTTCTTGCTCTGA
TACTTACATCAACCAGTGGCTGCTATTCTTTCTTGCCACCTTTAATGAAATCAGCACACT
ACTCATCGTTCTCACATCTTATGCGTTCATTGTTGTAACCATCCTCAAGATGCGTTCAGT
CAGTGGGCGCCGCAAAGCCTTCTCCACCTGTGCCTCCCACCTGACTGCCATCACCATCTT
CCATGGCACCATCCTCTTCCTTTACTGTGTGCCCAACTCCAAAAACTCCAGGCGCACAGT
CAAAGTGGCCTCTGTGTTTTACACCGTGGTGATCCCCATGTTGAATCCCCTGATCTACAG
TCTGAGAAATAAAGATGTCAAGGATACAGTCACCGAGATACTGGACACCAAAGTCTTCTC
TTACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT