OR56A1 ORF clone FHC27945

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27945

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Clone info.

Species

human

Clone Name

pFN21AE6047 Sequence (with vector) Restriction Map

Product ID

FHC27945

ORF Sequence

DNA sequence (954 bp)
Protein sequence (318 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6047

Symbol

OR56A1

Alias : OR11-75

Description

olfactory receptor, family 56, subfamily A, member 1

Original Clone ID

cp96047

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 954 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 318 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31405.1 3.4e-97 100.0 OR56A1 CCDS31404.1 1.1e-82 83.3 OR56A4 CCDS73248.1 1e-77 79.5 OR56A5 CCDS41614.1 1.4e-75 77.7 OR56A3 CCDS31406.1 2e-50 51.0 OR56B4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 33 57 PR00237 GPCR IPR000276 66 87 PR00237 GPCR IPR000725 99 110 PR00245 Olfactory receptor IPR000276 111 133 PR00237 GPCR IPR000725 136 148 PR00245 Olfactory receptor IPR000725 183 199 PR00245 Olfactory receptor IPR000725 243 252 PR00245 Olfactory receptor IPR000276 281 307 PR00237 GPCR IPR000725 292 303 PR00245 Olfactory receptor HMMPfam IPR000276 49 299 PF00001 GPCR ProfileScan IPR017452 48 299 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 35 SLPLSLLFLLAMGANTTLLITIQ 57 PRIMARY 23 2 68 YLLSLLSLLDIVLCLTVIPKVLA 90 PRIMARY 23 3 96 LRSISFPACFLQMFIMNSFLPME 118 SECONDARY 23 4 147 FVAKASVFIVVRNALLTAPIPIL 169 SECONDARY 23 5 210 GWTLLGSDLFLIFLSYTFILRAV 232 PRIMARY 23 6 246 STCGSHFILILFFSTILLVVVLT 268 PRIMARY 23 7 278 DILILLNVLHHLIPPALNPIVYG 300 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 40.6 97.8 NP_110401 320 611268 33.9 93.4 XP_011520808 322 603232 31.2 98.7 XP_011520809 312 603232 31.3 97.5 NP_036492 312 603232 31.3 97.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6047 Download

>KIEE6047  954 bp
ATGATTCAGCCTATGGCGTCACCCAGCAACAGCTCCACTGTCCCAGTCTCTGAATTCCTC
CTCATCTGCTTCCCCAACTTCCAGAGTTGGCAGCACTGGCTCTCCCTGCCCCTCAGCCTT
CTCTTCCTCCTGGCCATGGGAGCTAACACCACCCTCCTGATCACCATCCAGCTGGAGGCC
TCTCTGCACCAGCCCCTGTACTACCTGCTCAGCCTCCTCTCCCTGCTGGACATCGTGCTC
TGCCTCACCGTCATCCCCAAGGTCCTGGCCATCTTCTGGTATGATCTTAGGTCGATCAGC
TTCCCTGCCTGCTTCCTCCAGATGTTCATCATGAACAGTTTCCTCCCCATGGAGTCCTGC
ACGTTTATGGTCATGGCCTATGACCGTTATGTGGCCATCTGCCACCCACTGCGGTACCCA
TCCATCATCACTAATCAATTTGTGGCCAAAGCTAGTGTCTTCATTGTGGTGCGGAATGCG
CTTCTTACTGCACCCATTCCTATCCTCACTTCCCTGCTCCATTACTGTGGGGAAAATGTC
ATTGAGAACTGCATCTGTGCCAACTTGTCTGTGTCCAGGCTCTCCTGTGATAATTTCACC
CTTAACAGAATCTACCAATTTGTGGCTGGTTGGACCTTGCTGGGCTCAGATTTATTCCTC
ATCTTCCTCTCTTACACCTTCATTCTAAGAGCTGTGCTTAGATTCAAAGCAGAGGGGGCG
GCAGTGAAGGCCCTGAGCACATGTGGCTCCCACTTCATCCTCATTCTTTTCTTCAGCACC
ATACTGCTGGTTGTGGTGTTGACAAACGTGGCCAGAAAGAAGGTCCCCATGGACATCCTG
ATCCTGCTGAACGTCCTTCATCACCTTATTCCTCCTGCATTGAACCCTATTGTGTATGGG
GTTCGGACCAAAGAGATAAAACAGGGAATTCAGAAGTTACTGCAGAGAGGGAGG

ORF Protein

Cloned ORF protein sequence for pFN21AE6047 Download

>KIEE6047  318 aa
MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEA
SLHQPLYYLLSLLSLLDIVLCLTVIPKVLAIFWYDLRSISFPACFLQMFIMNSFLPMESC
TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENV
IENCICANLSVSRLSCDNFTLNRIYQFVAGWTLLGSDLFLIFLSYTFILRAVLRFKAEGA
AVKALSTCGSHFILILFFSTILLVVVLTNVARKKVPMDILILLNVLHHLIPPALNPIVYG
VRTKEIKQGIQKLLQRGR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6047 Download

>pFN21AE6047  5659 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATTCAGCCTATGGCGTCACCCAGCAACAGCTC
CACTGTCCCAGTCTCTGAATTCCTCCTCATCTGCTTCCCCAACTTCCAGAGTTGGCAGCA
CTGGCTCTCCCTGCCCCTCAGCCTTCTCTTCCTCCTGGCCATGGGAGCTAACACCACCCT
CCTGATCACCATCCAGCTGGAGGCCTCTCTGCACCAGCCCCTGTACTACCTGCTCAGCCT
CCTCTCCCTGCTGGACATCGTGCTCTGCCTCACCGTCATCCCCAAGGTCCTGGCCATCTT
CTGGTATGATCTTAGGTCGATCAGCTTCCCTGCCTGCTTCCTCCAGATGTTCATCATGAA
CAGTTTCCTCCCCATGGAGTCCTGCACGTTTATGGTCATGGCCTATGACCGTTATGTGGC
CATCTGCCACCCACTGCGGTACCCATCCATCATCACTAATCAATTTGTGGCCAAAGCTAG
TGTCTTCATTGTGGTGCGGAATGCGCTTCTTACTGCACCCATTCCTATCCTCACTTCCCT
GCTCCATTACTGTGGGGAAAATGTCATTGAGAACTGCATCTGTGCCAACTTGTCTGTGTC
CAGGCTCTCCTGTGATAATTTCACCCTTAACAGAATCTACCAATTTGTGGCTGGTTGGAC
CTTGCTGGGCTCAGATTTATTCCTCATCTTCCTCTCTTACACCTTCATTCTAAGAGCTGT
GCTTAGATTCAAAGCAGAGGGGGCGGCAGTGAAGGCCCTGAGCACATGTGGCTCCCACTT
CATCCTCATTCTTTTCTTCAGCACCATACTGCTGGTTGTGGTGTTGACAAACGTGGCCAG
AAAGAAGGTCCCCATGGACATCCTGATCCTGCTGAACGTCCTTCATCACCTTATTCCTCC
TGCATTGAACCCTATTGTGTATGGGGTTCGGACCAAAGAGATAAAACAGGGAATTCAGAA
GTTACTGCAGAGAGGGAGGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT