GPR88 ORF clone FHC20427

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC20427

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Clone info.

Species

human

Clone Name

pFN21AB8821 Sequence (with vector) Restriction Map

Product ID

FHC20427

ORF Sequence

DNA sequence (1152 bp)
Protein sequence (384 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB8821

Symbol

GPR88

Alias : COCPMR, STRG

Description

G protein-coupled receptor 88

Original Clone ID

cp00856

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1152 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 384 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS772.1 2.8e-119 99.7 GPR88 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 33 57 PR00237 GPCR IPR000276 66 87 PR00237 GPCR IPR000276 120 142 PR00237 GPCR IPR000276 318 344 PR00237 GPCR HMMPfam IPR000276 49 336 PF00001 GPCR ProfileScan IPR017452 48 336 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 VSLLYSGLAIGGTLANGMVIYLV 56 SECONDARY 23 2 117 GGLLGLGLTVSLLSHCLVALNRY 139 PRIMARY 23 3 160 GMLALSWALALGLVLLLPPWAPR 182 PRIMARY 23 4 192 YPALLAAAALLAQTALLLHCYLG 214 PRIMARY 23 5 286 VLLLCCVFLLATQPLVWVSLASG 308 PRIMARY 23 6 317 VQAASWLLCCALSALNPLLYTWR 339 PRIMARY 23 7 350 VLPGVGDAAAAAVAATAVPAVSQ 372 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071332 384 607468,616939 99.7 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8821 Download

>KIBB8821  1152 bp
ATGACCAACTCCTCCTCCACATCCACCTCCTCCACCACCGGTGGCTCGCTGCTGCTGCTC
TGCGAGGAAGAGGAGTCGTGGGCGGGCCGGCGCATCCCGGTGTCACTCCTGTATTCGGGC
CTGGCCATCGGGGGCACGCTGGCCAACGGCATGGTCATCTATCTCGTGTCGTCCTTCCGA
AAGCTGCAGACCACCAGCAACGCCTTCATCGTGAACGGCTGCGCCGCCGACCTCAGCGTC
TGCGCCCTCTGGATGCCGCAGGAGGCGGTGCTCGGGCTCCTGCCCACCGGCTCTGCGGAG
CCCCCCGCAGACTGGGACGGCGCTGGGGGCAGCTACCGCCTGCTACGGGGTGGGCTGCTG
GGCCTCGGACTCACGGTGTCCCTCCTCTCCCACTGCCTCGTGGCCCTGAACCGCTACCTG
CTCATCACCCGGGCGCCCGCCACCTACCAGGCGCTGTACCAGAGGCGCCACACGGCGGGC
ATGCTGGCGCTGTCCTGGGCGCTCGCCCTGGGCCTCGTGCTGCTGCTCCCGCCCTGGGCA
CCGCGGCCCGGCGCCGCGCCACCGCGAATCCACTACCCGGCGCTGCTGGCCGCCGCGGCG
CTGCTGGCGCAGACAGCTCTGCTGCTGCACTGCTACCTGGGCATCGTGCGCCGCGTGCGT
GTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGTTGCCCGGCTGC
GCCGCCGCCGCCGCCGCCTTCCCGGGCGCCCAGCACGCGCCGGGCCCCGGTGGCGCCGCG
CACCCGGCGCAGGCCCAGCCCCTGCCGCCCGCGCTGCACCCGCGGCGGGCACAGCGGCGT
CTCAGCGGCCTGTCGGTGCTGCTGCTCTGCTGCGTCTTCCTGCTGGCCACGCAGCCACTG
GTGTGGGTGAGCCTGGCCAGCGGCTTCTCGCTGCCGGTGCCCTGGGGAGTGCAGGCGGCC
AGCTGGCTCCTGTGCTGCGCCCTGTCCGCGCTCAATCCGCTGCTCTACACGTGGAGGAAC
GAGGAGTTCCGCCGCTCCGTGCGCTCAGTCCTGCCGGGCGTCGGCGACGCGGCGGCCGCT
GCCGTTGCCGCCACAGCCGTGCCCGCAGTGTCCCAGGCGCAACTGGGCACCCGCGCCGCG
GGCCAGCACTGG

ORF Protein

Cloned ORF protein sequence for pFN21AB8821 Download

>KIBB8821  384 aa
MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVIYLVSSFR
KLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGAGGSYRLLRGGLL
GLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPWA
PRPGAAPPRIHYPALLAAAALLAQTALLLHCYLGIVRRVRVSVKRVSVLNFHLLHQLPGC
AAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLLLCCVFLLATQPL
VWVSLASGFSLPVPWGVQAASWLLCCALSALNPLLYTWRNEEFRRSVRSVLPGVGDAAAA
AVAATAVPAVSQAQLGTRAAGQHW

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8821 Download

>pFN21AB8821  5857 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACCAACTCCTCCTCCACATCCACCTCCTCCAC
CACCGGTGGCTCGCTGCTGCTGCTCTGCGAGGAAGAGGAGTCGTGGGCGGGCCGGCGCAT
CCCGGTGTCACTCCTGTATTCGGGCCTGGCCATCGGGGGCACGCTGGCCAACGGCATGGT
CATCTATCTCGTGTCGTCCTTCCGAAAGCTGCAGACCACCAGCAACGCCTTCATCGTGAA
CGGCTGCGCCGCCGACCTCAGCGTCTGCGCCCTCTGGATGCCGCAGGAGGCGGTGCTCGG
GCTCCTGCCCACCGGCTCTGCGGAGCCCCCCGCAGACTGGGACGGCGCTGGGGGCAGCTA
CCGCCTGCTACGGGGTGGGCTGCTGGGCCTCGGACTCACGGTGTCCCTCCTCTCCCACTG
CCTCGTGGCCCTGAACCGCTACCTGCTCATCACCCGGGCGCCCGCCACCTACCAGGCGCT
GTACCAGAGGCGCCACACGGCGGGCATGCTGGCGCTGTCCTGGGCGCTCGCCCTGGGCCT
CGTGCTGCTGCTCCCGCCCTGGGCACCGCGGCCCGGCGCCGCGCCACCGCGAATCCACTA
CCCGGCGCTGCTGGCCGCCGCGGCGCTGCTGGCGCAGACAGCTCTGCTGCTGCACTGCTA
CCTGGGCATCGTGCGCCGCGTGCGTGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCA
CCTGCTGCACCAGTTGCCCGGCTGCGCCGCCGCCGCCGCCGCCTTCCCGGGCGCCCAGCA
CGCGCCGGGCCCCGGTGGCGCCGCGCACCCGGCGCAGGCCCAGCCCCTGCCGCCCGCGCT
GCACCCGCGGCGGGCACAGCGGCGTCTCAGCGGCCTGTCGGTGCTGCTGCTCTGCTGCGT
CTTCCTGCTGGCCACGCAGCCACTGGTGTGGGTGAGCCTGGCCAGCGGCTTCTCGCTGCC
GGTGCCCTGGGGAGTGCAGGCGGCCAGCTGGCTCCTGTGCTGCGCCCTGTCCGCGCTCAA
TCCGCTGCTCTACACGTGGAGGAACGAGGAGTTCCGCCGCTCCGTGCGCTCAGTCCTGCC
GGGCGTCGGCGACGCGGCGGCCGCTGCCGTTGCCGCCACAGCCGTGCCCGCAGTGTCCCA
GGCGCAACTGGGCACCCGCGCCGCGGGCCAGCACTGGGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT