OR6C65 ORF clone FHC16567

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC16567

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Clone info.

Species

human

Clone Name

pFN21AE5972 Sequence (with vector) Restriction Map

Product ID

FHC16567

ORF Sequence

DNA sequence (936 bp)
Protein sequence (312 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5972

Symbol

OR6C65

Description

olfactory receptor, family 6, subfamily C, member 65

Original Clone ID

cp95972

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 936 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 312 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31821.1 3.1e-71 100.0 OR6C65 CCDS31823.1 8.9e-54 74.4 OR6C76 CCDS31820.1 1.3e-52 72.8 OR6C75 CCDS31816.1 9.2e-52 69.9 OR6C74 CCDS31824.1 5.1e-49 65.7 OR6C2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000276 138 159 PR00237 GPCR IPR000725 174 190 PR00245 Olfactory receptor IPR000276 197 220 PR00237 GPCR IPR000725 234 243 PR00245 Olfactory receptor IPR000276 270 296 PR00237 GPCR IPR000725 281 292 PR00245 Olfactory receptor HMMPfam IPR000276 39 288 PF00001 GPCR ProfileScan IPR017452 39 288 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 TSIREFILLGFTDNPELQVVIFF 27 SECONDARY 23 2 31 ITYLLSVSGNMIIIMLTLSNIH 52 PRIMARY 22 3 95 SMAQVFFLILLGSTEFFLLAVMS 117 PRIMARY 23 4 142 LVISSWLAGFLIIFPPVIMGLQL 164 PRIMARY 23 5 200 LAVFTLMVTLALVVLSYTLILKT 222 PRIMARY 23 6 238 TCSSHMIVVSVSYGSCIFMCVKT 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_835462 317 608493 43.2 98.4 NP_003687 327 608495 43.8 93.9 NP_001004729 311 615702 39.3 97.1 NP_001005191 312 611538 38.9 97.1 NP_001001957 314 616729 43.5 95.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5972 Download

>KIEE5972  936 bp
ATGCCAAATATGACATCAATTAGAGAATTCATTCTTCTGGGATTTACAGATAACCCAGAG
TTACAAGTTGTGATATTCTTCTTTATGTTGATCACATACTTATTGAGTGTAAGTGGAAAC
ATGATCATCATTATGTTAACATTGTCAAATATTCATTTGAAAACTCCTATGTATTTCTTC
CTCAGGAATTTCTCTTTCTTAGAAATTTCATTTACGACAGTCTTCATTCCTAGATTTCTG
ATCAACATTGCTACAGGAGACACAACCATTTCCTATAATGCTTCCATGGCCCAAGTATTT
TTTTTAATTCTTTTGGGATCAACAGAATTTTTTCTTCTGGCTGTCATGTCTTATGATCGC
TATGTGGCTATCTGCAAACCTCTACATTATACAACCATCATGAGTAACAAAGTCTGTAAT
TGGCTTGTAATCAGCTCCTGGCTGGCTGGTTTTCTCATTATTTTTCCCCCCGTGATTATG
GGCCTCCAACTGGATTTTTGTGACTCCAGCACTATTGACCATTTCATCTGTGATTCTTCC
CCTATGCTGCTGATTGCTTGCACAGACACACAGTTTCTAGAGCTTATGGCATTTTTGCTA
GCAGTATTCACACTCATGGTAACTTTGGCCTTGGTGGTTCTCTCCTACACACTCATCCTT
AAAACAATTCTGAAGATTCCCTCTGCCCAGCAAAGGAAAAAGGCTTTTTCAACTTGTTCC
TCCCATATGATTGTGGTTTCTGTTTCTTATGGGAGTTGCATTTTTATGTGTGTAAAAACA
TCTGCAAAAGAAGGTATGGCTTTGAGCAAAGGTGTAGCAGTGCTTAATACCTCTGTTGCT
CCTATGTTGAATCCCTTTATTTATACCTTAAGAAACCAGCAGGTGAAACAGGCCCTTAGG
GAATTCACCAAAAAAATATTATCATTGAACAAGCAA

ORF Protein

Cloned ORF protein sequence for pFN21AE5972 Download

>KIEE5972  312 aa
MPNMTSIREFILLGFTDNPELQVVIFFFMLITYLLSVSGNMIIIMLTLSNIHLKTPMYFF
LRNFSFLEISFTTVFIPRFLINIATGDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDR
YVAICKPLHYTTIMSNKVCNWLVISSWLAGFLIIFPPVIMGLQLDFCDSSTIDHFICDSS
PMLLIACTDTQFLELMAFLLAVFTLMVTLALVVLSYTLILKTILKIPSAQQRKKAFSTCS
SHMIVVSVSYGSCIFMCVKTSAKEGMALSKGVAVLNTSVAPMLNPFIYTLRNQQVKQALR
EFTKKILSLNKQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5972 Download

>pFN21AE5972  5641 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCAAATATGACATCAATTAGAGAATTCATTCT
TCTGGGATTTACAGATAACCCAGAGTTACAAGTTGTGATATTCTTCTTTATGTTGATCAC
ATACTTATTGAGTGTAAGTGGAAACATGATCATCATTATGTTAACATTGTCAAATATTCA
TTTGAAAACTCCTATGTATTTCTTCCTCAGGAATTTCTCTTTCTTAGAAATTTCATTTAC
GACAGTCTTCATTCCTAGATTTCTGATCAACATTGCTACAGGAGACACAACCATTTCCTA
TAATGCTTCCATGGCCCAAGTATTTTTTTTAATTCTTTTGGGATCAACAGAATTTTTTCT
TCTGGCTGTCATGTCTTATGATCGCTATGTGGCTATCTGCAAACCTCTACATTATACAAC
CATCATGAGTAACAAAGTCTGTAATTGGCTTGTAATCAGCTCCTGGCTGGCTGGTTTTCT
CATTATTTTTCCCCCCGTGATTATGGGCCTCCAACTGGATTTTTGTGACTCCAGCACTAT
TGACCATTTCATCTGTGATTCTTCCCCTATGCTGCTGATTGCTTGCACAGACACACAGTT
TCTAGAGCTTATGGCATTTTTGCTAGCAGTATTCACACTCATGGTAACTTTGGCCTTGGT
GGTTCTCTCCTACACACTCATCCTTAAAACAATTCTGAAGATTCCCTCTGCCCAGCAAAG
GAAAAAGGCTTTTTCAACTTGTTCCTCCCATATGATTGTGGTTTCTGTTTCTTATGGGAG
TTGCATTTTTATGTGTGTAAAAACATCTGCAAAAGAAGGTATGGCTTTGAGCAAAGGTGT
AGCAGTGCTTAATACCTCTGTTGCTCCTATGTTGAATCCCTTTATTTATACCTTAAGAAA
CCAGCAGGTGAAACAGGCCCTTAGGGAATTCACCAAAAAAATATTATCATTGAACAAGCA
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T