ZNF80 ORF clone FHC11737

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11737

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Clone info.

Species

human

Clone Name

pFN21AB9670 Sequence (with vector) Restriction Map

Product ID

FHC11737

Flexi Clone PID

FXC11737

ORF Sequence

DNA sequence (819 bp)
Protein sequence (273 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529317]

Gene

KIBB9670

Symbol

ZNF80

Alias : pT17

Description

zinc finger protein 80

Original Clone ID

cp00253

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 819 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 273 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2979.1 3.7e-67 99.3 ZNF80 CCDS32991.1 6.6e-37 58.1 ZNF599 CCDS46208.1 1.2e-35 53.7 ZNF805 CCDS46207.1 1.3e-35 53.7 ZNF805 CCDS35500.2 6.7e-34 55.3 ZNF550 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 49 71 PF00096 Zinc finger IPR007087 162 183 PF00096 Zinc finger IPR007087 217 239 PF00096 Zinc finger HMMSmart IPR015880 49 71 SM00355 Zinc finger IPR015880 77 99 SM00355 Zinc finger IPR015880 105 127 SM00355 Zinc finger IPR015880 133 155 SM00355 Zinc finger IPR015880 161 183 SM00355 Zinc finger IPR015880 189 211 SM00355 Zinc finger IPR015880 217 239 SM00355 Zinc finger ProfileScan IPR007087 49 76 PS50157 Zinc finger IPR007087 77 104 PS50157 Zinc finger IPR007087 105 132 PS50157 Zinc finger IPR007087 133 160 PS50157 Zinc finger IPR007087 161 188 PS50157 Zinc finger IPR007087 189 216 PS50157 Zinc finger IPR007087 217 244 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016862623 273 194553 99.3 100.0 XP_016862621 273 194553 99.3 100.0 XP_016862622 273 194553 99.3 100.0 XP_016862624 273 194553 99.3 100.0 XP_016862625 273 194553 99.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9670 Download

>KIBB9670  819 bp
ATGAGCCCTAAACGCGATGGGTTGGGGACAGGTGATGGTCTGCACTCACAGGTTTTACAG
GAGCAGGTCTCCACAGGAGACAATCTCCATGAATGTGACTCGCAGGGACCAAGTAAAGAC
ACTTTGGTTCGTGAGGGGAAGACCTACAAATGCAAGGAATGTGGGAGCGTGTTTAACAAA
AACAGCCTCCTTGTTCGACATCAGCAGATTCACACTGGGGTGAAGCCTTATGAATGCCAG
GAGTGTGGAAAAGCCTTTCCTGAAAAGGTCGACTTCGTTCGACCCATGAGGATTCACACA
GGGGAGAAGCCCTGTAAGTGCGTGGAGTGCGGGAAGGTCTTCAACCGCAGGTCGCACCTC
CTGTGCTACCGCCAGATTCACACTGGAGAGAAGCCCTATGAGTGCAGCGAGTGTGGAAAG
ACCTTCAGCTATCACTCTGTCTTCATCCAGCATCGTGTGACCCACACTGGAGAAAAACTC
TTTGGGTGCAAAGAATGTGGAAAAACCTTTTACTACAACTCTTCCTTAACCCGGCACATG
AAGATTCACACTGGAGAGAAGCCCTGCAAGTGCAGTGAGTGCGGGAAGACCTTCACCTAC
CACTCTGTTTTCTTCCGACATAGTATGACCCACACTGCAGGAAAGCCCTACGAGTGTAAA
GAATGTGGGAAAGGTTTTTACTACAGCTATTCCCTCACTCGACATACAAGGAGTCACACT
GGAGAGAAACCTTATGAGTGCCTTGAACATAGAAAGGCCTTTGGCTACCACTCTGCTTTT
GCCCAACAGAGTAAGATCCACTCTGGAGGAAAAAACCTT

ORF Protein

Cloned ORF protein sequence for pFN21AB9670 Download

>KIBB9670  273 aa
MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9670 Download

>pFN21AB9670  5524 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCCCTAAACGCGATGGGTTGGGGACAGGTGA
TGGTCTGCACTCACAGGTTTTACAGGAGCAGGTCTCCACAGGAGACAATCTCCATGAATG
TGACTCGCAGGGACCAAGTAAAGACACTTTGGTTCGTGAGGGGAAGACCTACAAATGCAA
GGAATGTGGGAGCGTGTTTAACAAAAACAGCCTCCTTGTTCGACATCAGCAGATTCACAC
TGGGGTGAAGCCTTATGAATGCCAGGAGTGTGGAAAAGCCTTTCCTGAAAAGGTCGACTT
CGTTCGACCCATGAGGATTCACACAGGGGAGAAGCCCTGTAAGTGCGTGGAGTGCGGGAA
GGTCTTCAACCGCAGGTCGCACCTCCTGTGCTACCGCCAGATTCACACTGGAGAGAAGCC
CTATGAGTGCAGCGAGTGTGGAAAGACCTTCAGCTATCACTCTGTCTTCATCCAGCATCG
TGTGACCCACACTGGAGAAAAACTCTTTGGGTGCAAAGAATGTGGAAAAACCTTTTACTA
CAACTCTTCCTTAACCCGGCACATGAAGATTCACACTGGAGAGAAGCCCTGCAAGTGCAG
TGAGTGCGGGAAGACCTTCACCTACCACTCTGTTTTCTTCCGACATAGTATGACCCACAC
TGCAGGAAAGCCCTACGAGTGTAAAGAATGTGGGAAAGGTTTTTACTACAGCTATTCCCT
CACTCGACATACAAGGAGTCACACTGGAGAGAAACCTTATGAGTGCCTTGAACATAGAAA
GGCCTTTGGCTACCACTCTGCTTTTGCCCAACAGAGTAAGATCCACTCTGGAGGAAAAAA
CCTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT