SVOP ORF clone FHC11534

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11534

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Clone info.

Species

human

Clone Name

pFN21AB4569 Sequence (with vector) Restriction Map

Product ID

FHC11534

Flexi Clone PID

FXC11534

ORF Sequence

DNA sequence (1644 bp)
Protein sequence (548 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529106]

Gene

KIBB4569

Symbol

SVOP

Description

SV2 related protein

Original Clone ID

fk08874

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1644 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 548 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS73520.1 0 100.0 SVOP CCDS47721.1 7.5e-79 39.1 SVOPL CCDS5848.1 2.5e-49 37.2 SVOPL CCDS75261.1 4.8e-20 27.9 SV2C CCDS43331.1 5.1e-20 27.9 SV2C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR005828 111 331 PF00083 General substrate transporter IPR011701 384 523 PF07690 Major facilitator superfamily HMMTigr IPR004749 10 515 TIGR00898 Organic cation transport protein ProfileScan IPR020846 86 513 PS50850 Major facilitator superfamily domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 87 SVLTGLAWMADAMEMMILSILAP 109 SECONDARY 23 2 118 PSWQVALLTSVVFVGMMSSSTLW 140 SECONDARY 23 3 160 TLYYGILSAFAPVYSWILVLRGL 182 PRIMARY 23 4 209 CILLIEVFWAIGTVFEVVLAVFV 231 PRIMARY 23 5 239 WLLILSAVPLLLFAVLCFWLPES 261 PRIMARY 23 6 322 FIWFSNAFSYYGLVLLTTELFQA 344 SECONDARY 23 7 375 DLLWTTLSEFPGVLVTLWIIDRL 397 SECONDARY 23 8 411 SFCSLLLFICVGRNVLTLLLFIA 433 PRIMARY 23 9 461 LGTCSGMARVGALITPFIAQVML 483 SECONDARY 23 10 490 TLAVYSGCCLLAALASCFLPIET 512 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_061181 548 611699 100.0 100.0 XP_005250200 492 611700 39.1 85.9 NP_001132928 492 611700 39.1 85.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB4569 Download

>KIBB4569  1644 bp
ATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCCGGTTGTGAAATTCCGTCGCACAGGC
GAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGG
GTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTT
GCCAATCCCACTGATGATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGA
AAATTTCAGTGGAAGCTGTCTGTTCTCACTGGCTTGGCTTGGATGGCTGATGCCATGGAG
ATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGG
CAGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGG
GGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACT
CTGTACTATGGCATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGG
GGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTC
CTTCCCATGAAAGCCAGAGCTAAATGTATTTTGCTGATTGAGGTATTCTGGGCCATCGGG
ACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTTGGCTG
CTCATCCTCTCAGCTGTCCCGCTCCTCCTCTTTGCCGTGCTGTGTTTCTGGCTGCCTGAA
AGTGCAAGGTATGATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGG
ATAGCAACTGAAAACGGAGCTCCCATGCCGCTGGGGAAACTCATCATCTCCAGACAGGAA
GACCGAGGCAAAATGAGGGACCTTTTCACACCCCATTTTAGATGGACAACTTTGCTGCTG
TGGTTTATATGGTTTTCCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAA
CTCTTCCAGGCAGGAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAA
TGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATGGACTTGCTGTGGACCACC
CTCTCTGAGTTTCCAGGTGTCCTTGTGACTCTGTGGATTATTGACCGCCTGGGGCGCAAG
AAGACCATGGCCCTGTGCTTTGTCATCTTCTCCTTCTGCAGCCTCCTGCTGTTTATCTGT
GTTGGAAGAAATGTGCTCACTCTGTTACTCTTCATTGCAAGAGCGTTTATTTCTGGAGGC
TTTCAAGCGGCATATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGC
CTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAG
GTGATGCTGGAATCCTCTGTGTACCTGACTCTGGCAGTTTACAGTGGCTGCTGCCTCCTG
GCTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCC
AGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACC
AGGTCGAACTCTGGCTCTCAGGAA

ORF Protein

Cloned ORF protein sequence for pFN21AB4569 Download

>KIBB4569  548 aa
MEEDLFQLRQLPVVKFRRTGESARSEDDTASGEHEVQIEGVHVGLEAVELDDGAAVPKEF
ANPTDDTFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSW
QVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLR
GLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWL
LILSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLIISRQE
DRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAK
CSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFIC
VGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQ
VMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQESSHREWGQEMVGRGMHGAGVT
RSNSGSQE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB4569 Download

>pFN21AB4569  6349 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCC
GGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGG
AGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGA
TGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCCCACTGATGATACTTTCATGGTGGAAGA
TGCAGTGGAAGCCATTGGCTTTGGAAAATTTCAGTGGAAGCTGTCTGTTCTCACTGGCTT
GGCTTGGATGGCTGATGCCATGGAGATGATGATCCTCAGCATCCTGGCACCACAGCTGCA
TTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGG
CATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGG
GCTGAAGATCAGCGTGCTGTGGACTCTGTACTATGGCATCCTTAGTGCATTTGCGCCCGT
GTATAGCTGGATCCTGGTGCTCCGGGGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCA
GTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAGCCAGAGCTAAATGTATTTTGCT
GATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGAT
GCCCAGCCTGGGCTGGCGTTGGCTGCTCATCCTCTCAGCTGTCCCGCTCCTCCTCTTTGC
CGTGCTGTGTTTCTGGCTGCCTGAAAGTGCAAGGTATGATGTGCTGTCAGGGAACCAGGA
AAAGGCAATCGCCACCTTAAAGAGGATAGCAACTGAAAACGGAGCTCCCATGCCGCTGGG
GAAACTCATCATCTCCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCA
TTTTAGATGGACAACTTTGCTGCTGTGGTTTATATGGTTTTCCAATGCATTCTCTTACTA
CGGGTTAGTTCTACTCACCACAGAACTCTTCCAGGCAGGAGATGTCTGCGGCATCTCCAG
TCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGA
TTACATGGACTTGCTGTGGACCACCCTCTCTGAGTTTCCAGGTGTCCTTGTGACTCTGTG
GATTATTGACCGCCTGGGGCGCAAGAAGACCATGGCCCTGTGCTTTGTCATCTTCTCCTT
CTGCAGCCTCCTGCTGTTTATCTGTGTTGGAAGAAATGTGCTCACTCTGTTACTCTTCAT
TGCAAGAGCGTTTATTTCTGGAGGCTTTCAAGCGGCATATGTTTACACACCTGAGGTCTA
CCCCACGGCAACGCGGGCCCTCGGCCTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGC
TCTCATCACTCCGTTCATCGCCCAGGTGATGCTGGAATCCTCTGTGTACCTGACTCTGGC
AGTTTACAGTGGCTGCTGCCTCCTGGCTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGAC
CAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCG
AGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAAGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT