OR1A2 ORF clone FHC11335

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11335

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Clone info.

Species

human

Clone Name

pFN21AE0881 Sequence (with vector) Restriction Map

Product ID

FHC11335

Flexi Clone PID

FXC11335

ORF Sequence

DNA sequence (927 bp)
Protein sequence (309 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529297]

Gene

KIEE0881

Symbol

OR1A2

Alias : OR17-6

Description

olfactory receptor, family 1, subfamily A, member 2

Original Clone ID

cp01281

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 927 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 309 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11021.1 2.1e-82 99.4 OR1A2 CCDS11022.1 2.2e-69 83.2 OR1A1 CCDS10496.1 2.1e-42 52.4 OR1F1 CCDS35122.1 3.3e-40 51.1 OR1J4 CCDS6844.1 8.9e-40 52.1 OR1N1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000276 140 161 PR00237 GPCR IPR000725 176 192 PR00245 Olfactory receptor IPR000276 198 221 PR00237 GPCR IPR000725 235 244 PR00245 Olfactory receptor IPR000276 270 296 PR00237 GPCR IPR000725 281 292 PR00245 Olfactory receptor HMMPfam IPR000276 41 288 PF00001 GPCR ProfileScan IPR017452 41 288 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 28 FVIFLCIYPITLTGNLLIILAIC 50 PRIMARY 23 2 60 YFLLANLSLVDIIFSSVTIPKVL 82 PRIMARY 23 3 87 LGSKFISFGGCLMQMYFMIALA 108 SECONDARY 22 4 136 MSPRSCILLIAGSWVIGNTSALP 158 SECONDARY 23 5 201 LGVGVFSLPLLCIIVSYVQVFST 223 PRIMARY 23 6 232 SLFKAFCTCGSHLTVVFLYYGTT 254 SECONDARY 23 7 269 DAVITVMYVAVTPALNPFIYSLR 291 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036492 312 603232 52.4 100.0 XP_011520809 312 603232 52.4 100.0 XP_011520808 322 603232 52.4 100.0 NP_002539 312 164342 48.2 98.7 NP_001005191 312 611538 46.6 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0881 Download

>KIEE0881  927 bp
ATGAAGAAAGAAAATCAATCCTTTAACCTGGATTTTATTCTCCTGGGAGTTACTAGTCAG
CAAGAACAGAATAATGTCTTCTTTGTGATTTTTTTGTGCATTTACCCCATCACACTGACT
GGAAATCTGCTCATCATCTTGGCCATCTGTGCTGACATTCGCCTTCACAACCCCATGTAT
TTTCTCCTTGCCAACCTCTCCTTGGTTGACATCATCTTCTCATCCGTAACCATCCCTAAG
GTGCTGGCCAACCATCTCTTGGGCAGCAAGTTCATCTCCTTTGGGGGATGCCTAATGCAG
ATGTATTTCATGATAGCCTTGGCCAAGGCAGACAGCTATACCTTGGCTGCAATGGCATAC
GATCGAGCTGTGGCCATCAGCTGCCCACTTCATTACACAACAATTATGAGTCCACGGTCT
TGTATCCTGCTTATTGCTGGGTCTTGGGTGATTGGAAACACCAGTGCTCTCCCCCACACT
CTGCTCACAGCTAGTTTGTCCTTCTGTGGCAACCAGGAAGTAGCCAATTTCTACTGTGAC
ATTATGCCTTTGCTGAAGTTGTCCTGTTCTGACGTCCACTTTAATGTGAAGATGATGTAC
CTAGGGGTCGGCGTTTTCTCTTTGCCATTACTATGCATCATTGTCTCCTATGTTCAGGTC
TTTTCCACAGTCTTCCAAGTTCCATCTACCAAGAGTCTATTCAAAGCCTTCTGCACCTGT
GGCTCCCACCTCACAGTTGTTTTTTTATATTATGGTACAACGATGTGCATGTATTTCCGC
CCTCTGACCAGTTACAGCCCCAAAGATGCAGTGATAACTGTGATGTATGTGGCAGTGACC
CCAGCATTAAATCCTTTCATCTATAGTCTGAGAAATTGTGATATGAAGGCAGCCCTACAG
AAACTCTTCAGCAAGAGAATCTCCTCA

ORF Protein

Cloned ORF protein sequence for pFN21AE0881 Download

>KIEE0881  309 aa
MKKENQSFNLDFILLGVTSQQEQNNVFFVIFLCIYPITLTGNLLIILAICADIRLHNPMY
FLLANLSLVDIIFSSVTIPKVLANHLLGSKFISFGGCLMQMYFMIALAKADSYTLAAMAY
DRAVAISCPLHYTTIMSPRSCILLIAGSWVIGNTSALPHTLLTASLSFCGNQEVANFYCD
IMPLLKLSCSDVHFNVKMMYLGVGVFSLPLLCIIVSYVQVFSTVFQVPSTKSLFKAFCTC
GSHLTVVFLYYGTTMCMYFRPLTSYSPKDAVITVMYVAVTPALNPFIYSLRNCDMKAALQ
KLFSKRISS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0881 Download

>pFN21AE0881  5632 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGAAAGAAAATCAATCCTTTAACCTGGATTT
TATTCTCCTGGGAGTTACTAGTCAGCAAGAACAGAATAATGTCTTCTTTGTGATTTTTTT
GTGCATTTACCCCATCACACTGACTGGAAATCTGCTCATCATCTTGGCCATCTGTGCTGA
CATTCGCCTTCACAACCCCATGTATTTTCTCCTTGCCAACCTCTCCTTGGTTGACATCAT
CTTCTCATCCGTAACCATCCCTAAGGTGCTGGCCAACCATCTCTTGGGCAGCAAGTTCAT
CTCCTTTGGGGGATGCCTAATGCAGATGTATTTCATGATAGCCTTGGCCAAGGCAGACAG
CTATACCTTGGCTGCAATGGCATACGATCGAGCTGTGGCCATCAGCTGCCCACTTCATTA
CACAACAATTATGAGTCCACGGTCTTGTATCCTGCTTATTGCTGGGTCTTGGGTGATTGG
AAACACCAGTGCTCTCCCCCACACTCTGCTCACAGCTAGTTTGTCCTTCTGTGGCAACCA
GGAAGTAGCCAATTTCTACTGTGACATTATGCCTTTGCTGAAGTTGTCCTGTTCTGACGT
CCACTTTAATGTGAAGATGATGTACCTAGGGGTCGGCGTTTTCTCTTTGCCATTACTATG
CATCATTGTCTCCTATGTTCAGGTCTTTTCCACAGTCTTCCAAGTTCCATCTACCAAGAG
TCTATTCAAAGCCTTCTGCACCTGTGGCTCCCACCTCACAGTTGTTTTTTTATATTATGG
TACAACGATGTGCATGTATTTCCGCCCTCTGACCAGTTACAGCCCCAAAGATGCAGTGAT
AACTGTGATGTATGTGGCAGTGACCCCAGCATTAAATCCTTTCATCTATAGTCTGAGAAA
TTGTGATATGAAGGCAGCCCTACAGAAACTCTTCAGCAAGAGAATCTCCTCAGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT