HNRNPA0 ORF clone FHC11251

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11251

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Clone info.

Species

human

Clone Name

pFN21AE0717 Sequence (with vector) Restriction Map

Product ID

FHC11251

Flexi Clone PID

FXC11251

ORF Sequence

DNA sequence (915 bp)
Protein sequence (305 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528924]

Gene

KIEE0717

Symbol

HNRNPA0

Alias : HNRPA0

Description

heterogeneous nuclear ribonucleoprotein A0

Original Clone ID

cs02217

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 915 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 305 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4193.1 2.8e-55 100.0 HNRNPA0 CCDS82536.1 4.7e-25 54.2 HNRNPA3 CCDS2273.1 4.9e-25 54.2 HNRNPA3 CCDS41793.1 2.3e-24 52.0 HNRNPA1 CCDS31980.1 6.1e-24 51.0 HNRNPA1L2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 9 75 PF00076 RNA recognition motif domain IPR000504 100 168 PF00076 RNA recognition motif domain HMMSmart IPR000504 8 80 SM00360 RNA recognition motif domain IPR000504 99 171 SM00360 RNA recognition motif domain ProfileScan IPR000504 7 86 PS50102 RNA recognition motif domain IPR000504 98 175 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006796 305 609409 100.0 100.0 NP_001317179 331 605372 56.2 98.7 NP_001317180 331 605372 56.2 98.7 NP_001317176 356 605372 54.2 98.0 NP_001317177 356 605372 54.2 98.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0717 Download

>KIEE0717  915 bp
ATGGAGAATTCTCAGTTGTGTAAGCTGTTCATCGGCGGCCTCAATGTGCAGACGAGTGAG
TCGGGCCTGCGCGGCCACTTTGAGGCCTTTGGGACTCTGACGGACTGCGTGGTGGTGGTG
AATCCCCAGACCAAGCGCTCCCGTTGCTTTGGCTTCGTGACCTACTCCAATGTGGAGGAG
GCGGACGCCGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAACACTGTGGAGCTGAAG
CGGGCGGTGTCCCGGGAGGATTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTC
TTTGTCGGAGGCCTTAAAGGAGACGTGGCTGAGGGCGACCTGATCGAGCACTTCTCGCAG
TTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGACAAGCAGTCCGGCAAGAAGCGTGGA
TTCGGCTTCGTGTATTTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTC
CATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTAC
TCCGGTGGGGGTGGAGGCGGCTCCCGATCCTCCCGGGGCGGCCGAGGCGGCCGGGGGCGC
GGCGGTGGTCGAGACCAGAACGGCCTTTCCAAGGGCGGCGGCGGCGGTTACAACAGCTAC
GGTGGTTACGGCGGCGGCGGAGGCGGCGGCTACAATGCCTACGGAGGCGGCGGCGGCGGT
TCGTCCTACGGTGGGAGCGACTACGGTAACGGCTTCGGCGGCTTCGGCAGCTACAGCCAG
CATCAGTCCTCCTATGGGCCCATGAAGAGCGGCGGCGGCGGCGGCGGTGGAGGCAGTAGC
TGGGGCGGTCGCAGTAATAGTGGACCTTACAGAGGCGGCTATGGCGGTGGGGGTGGCTAT
GGAGGCAGCTCCTTC

ORF Protein

Cloned ORF protein sequence for pFN21AE0717 Download

>KIEE0717  305 aa
MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEE
ADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQ
FGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIY
SGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGG
SSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGY
GGSSF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0717 Download

>pFN21AE0717  5620 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGAATTCTCAGTTGTGTAAGCTGTTCATCGG
CGGCCTCAATGTGCAGACGAGTGAGTCGGGCCTGCGCGGCCACTTTGAGGCCTTTGGGAC
TCTGACGGACTGCGTGGTGGTGGTGAATCCCCAGACCAAGCGCTCCCGTTGCTTTGGCTT
CGTGACCTACTCCAATGTGGAGGAGGCGGACGCCGCCATGGCCGCCTCGCCCCATGCCGT
GGACGGCAACACTGTGGAGCTGAAGCGGGCGGTGTCCCGGGAGGATTCGGCGCGGCCCGG
TGCCCACGCCAAGGTTAAGAAGCTCTTTGTCGGAGGCCTTAAAGGAGACGTGGCTGAGGG
CGACCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGA
CAAGCAGTCCGGCAAGAAGCGTGGATTCGGCTTCGTGTATTTCCAGAATCACGACGCGGC
AGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAA
AGCAGTCCCCAAGGAGGATATCTACTCCGGTGGGGGTGGAGGCGGCTCCCGATCCTCCCG
GGGCGGCCGAGGCGGCCGGGGGCGCGGCGGTGGTCGAGACCAGAACGGCCTTTCCAAGGG
CGGCGGCGGCGGTTACAACAGCTACGGTGGTTACGGCGGCGGCGGAGGCGGCGGCTACAA
TGCCTACGGAGGCGGCGGCGGCGGTTCGTCCTACGGTGGGAGCGACTACGGTAACGGCTT
CGGCGGCTTCGGCAGCTACAGCCAGCATCAGTCCTCCTATGGGCCCATGAAGAGCGGCGG
CGGCGGCGGCGGTGGAGGCAGTAGCTGGGGCGGTCGCAGTAATAGTGGACCTTACAGAGG
CGGCTATGGCGGTGGGGGTGGCTATGGAGGCAGCTCCTTCGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT