IRX6 ORF clone FHC05538

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC05538

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Clone info.

Species

human

Clone Name

pFN21AB9729 Sequence (with vector) Restriction Map

Product ID

FHC05538

Flexi Clone PID

FXC05538

ORF Sequence

DNA sequence (1338 bp)
Protein sequence (446 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463805]

Gene

KIBB9729

Symbol

IRX6

Alias : IRX-3, IRX7, IRXB3

Description

iroquois homeobox 6

Original Clone ID

cp00312

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1338 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 446 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32449.1 1.4e-114 100.0 IRX6 CCDS3867.1 3.7e-29 44.1 IRX4 CCDS10750.1 2.8e-19 40.9 IRX3 CCDS3868.1 2.3e-16 36.6 IRX2 CCDS75225.1 5.6e-15 41.8 IRX4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 150 206 PF00046 Homeobox HMMSmart IPR001356 146 211 SM00389 Homeobox IPR003893 344 361 SM00548 Iroquois-class homeodomain protein ProfileScan IPR001356 144 207 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_077311 446 606196 100.0 100.0 XP_005256194 445 606196 100.0 99.6 NP_001265561 519 606199 44.1 91.3 NP_057442 519 606199 44.1 91.3 NP_001265563 519 606199 44.1 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9729 Download

>KIBB9729  1338 bp
ATGTCCTTCCCACACTTTGGACACCCGTACCGCGGCGCTTCCCAGTTTCTGGCGTCGGCA
AGTTCCAGCACCACATGCTGCGAATCTACCCAACGCTCTGTCTCAGATGTGGCATCAGGC
TCCACCCCAGCGCCCGCTCTCTGCTGCGCACCCTACGATAGTCGACTGCTGGGCAGTGCG
CGACCGGAGCTGGGCGCCGCCTTGGGCATCTATGGAGCACCCTATGCGGCCGCTGCAGCT
GCCCAGAGCTACCCTGGCTACCTGCCCTATAGCCCAGAGCCCCCCTCACTGTATGGGGCA
CTGAATCCACAGTATGAATTTAAGGAGGCTGCAGGGAGTTTTACATCCAGCCTGGCACAA
CCAGGAGCCTATTATCCCTATGAGCGGACTCTGGGGCAGTACCAATATGAACGGTATGGC
GCAGTGGAATTGAGTGGCGCCGGTCGCCGAAAGAACGCGACCCGGGAGACCACCAGTACA
CTCAAGGCCTGGCTCAACGAGCACCGCAAAAACCCCTACCCCACTAAGGGTGAGAAGATC
ATGCTGGCCATCATCACCAAGATGACCCTCACCCAGGTGTCCACCTGGTTCGCCAACGCA
CGCCGGCGCCTCAAGAAAGAGAACAAAATGACATGGGCGCCCAAGAACAAAGGTGGGGAG
GAGAGGAAGGCAGAGGGAGGAGAGGAGGACTCACTAGGCTGCCTAACTGCTGACACCAAA
GAAGTTACTGCTAGCCAGGAGGCCCGGGGGCTCCGGCTGAGTGACCTGGAAGACCTGGAG
GAAGAGGAGGAGGAGGAGGAGGAAGCTGAAGACGAGGAGGTAGTGGCCACAGCTGGGGAC
AGGCTGACGGAGTTCCGAAAGGGCGCGCAGTCACTGCCTGGGCCGTGCGCTGCAGCTCGA
GAGGGCCGATTGGAGCGCAGGGAGTGCGGCCTGGCTGCGCCCCGCTTCTCCTTCAATGAC
CCTTCCGGATCGGAAGAAGCTGACTTCCTCTCGGCGGAGACAGGCAGCCCTAGGTTGACC
ATGCACTACCCATGCTTGGAGAAACCGCGCATCTGGTCTCTGGCGCACACCGCGACAGCC
AGCGCTGTTGAAGGTGCACCCCCAGCCCGGCCTAGGCCACGAAGTCCTGAGTGCCGTATG
ATTCCTGGACAGCCTCCTGCCTCTGCCCGGCGACTCTCAGTCCCCAGAGACTCCGCGTGC
GACGAGTCTTCCTGCATACCCAAAGCCTTTGGAAACCCCAAGTTTGCCCTGCAGGGACTA
CCGCTGAACTGTGCGCCGTGCCCGCGGAGGAGCGAGCCTGTAGTGCAGTGCCAGTACCCG
TCTGGAGCAGAAGCAGGT

ORF Protein

Cloned ORF protein sequence for pFN21AB9729 Download

>KIBB9729  446 aa
MSFPHFGHPYRGASQFLASASSSTTCCESTQRSVSDVASGSTPAPALCCAPYDSRLLGSA
RPELGAALGIYGAPYAAAAAAQSYPGYLPYSPEPPSLYGALNPQYEFKEAAGSFTSSLAQ
PGAYYPYERTLGQYQYERYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLTADTK
EVTASQEARGLRLSDLEDLEEEEEEEEEAEDEEVVATAGDRLTEFRKGAQSLPGPCAAAR
EGRLERRECGLAAPRFSFNDPSGSEEADFLSAETGSPRLTMHYPCLEKPRIWSLAHTATA
SAVEGAPPARPRPRSPECRMIPGQPPASARRLSVPRDSACDESSCIPKAFGNPKFALQGL
PLNCAPCPRRSEPVVQCQYPSGAEAG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9729 Download

>pFN21AB9729  6043 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCCTTCCCACACTTTGGACACCCGTACCGCGG
CGCTTCCCAGTTTCTGGCGTCGGCAAGTTCCAGCACCACATGCTGCGAATCTACCCAACG
CTCTGTCTCAGATGTGGCATCAGGCTCCACCCCAGCGCCCGCTCTCTGCTGCGCACCCTA
CGATAGTCGACTGCTGGGCAGTGCGCGACCGGAGCTGGGCGCCGCCTTGGGCATCTATGG
AGCACCCTATGCGGCCGCTGCAGCTGCCCAGAGCTACCCTGGCTACCTGCCCTATAGCCC
AGAGCCCCCCTCACTGTATGGGGCACTGAATCCACAGTATGAATTTAAGGAGGCTGCAGG
GAGTTTTACATCCAGCCTGGCACAACCAGGAGCCTATTATCCCTATGAGCGGACTCTGGG
GCAGTACCAATATGAACGGTATGGCGCAGTGGAATTGAGTGGCGCCGGTCGCCGAAAGAA
CGCGACCCGGGAGACCACCAGTACACTCAAGGCCTGGCTCAACGAGCACCGCAAAAACCC
CTACCCCACTAAGGGTGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCACCCA
GGTGTCCACCTGGTTCGCCAACGCACGCCGGCGCCTCAAGAAAGAGAACAAAATGACATG
GGCGCCCAAGAACAAAGGTGGGGAGGAGAGGAAGGCAGAGGGAGGAGAGGAGGACTCACT
AGGCTGCCTAACTGCTGACACCAAAGAAGTTACTGCTAGCCAGGAGGCCCGGGGGCTCCG
GCTGAGTGACCTGGAAGACCTGGAGGAAGAGGAGGAGGAGGAGGAGGAAGCTGAAGACGA
GGAGGTAGTGGCCACAGCTGGGGACAGGCTGACGGAGTTCCGAAAGGGCGCGCAGTCACT
GCCTGGGCCGTGCGCTGCAGCTCGAGAGGGCCGATTGGAGCGCAGGGAGTGCGGCCTGGC
TGCGCCCCGCTTCTCCTTCAATGACCCTTCCGGATCGGAAGAAGCTGACTTCCTCTCGGC
GGAGACAGGCAGCCCTAGGTTGACCATGCACTACCCATGCTTGGAGAAACCGCGCATCTG
GTCTCTGGCGCACACCGCGACAGCCAGCGCTGTTGAAGGTGCACCCCCAGCCCGGCCTAG
GCCACGAAGTCCTGAGTGCCGTATGATTCCTGGACAGCCTCCTGCCTCTGCCCGGCGACT
CTCAGTCCCCAGAGACTCCGCGTGCGACGAGTCTTCCTGCATACCCAAAGCCTTTGGAAA
CCCCAAGTTTGCCCTGCAGGGACTACCGCTGAACTGTGCGCCGTGCCCGCGGAGGAGCGA
GCCTGTAGTGCAGTGCCAGTACCCGTCTGGAGCAGAAGCAGGTGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT