OR2A13P ORF clone FHC03536

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Halotag ORF Clone FHC03536

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Clone info.

Species

human

Clone Name

pFN21AE0824 Sequence (with vector) Restriction Map

Product ID

FHC03536

Flexi Clone PID

FXC03536

ORF Sequence

DNA sequence (804 bp)
Protein sequence (268 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529229]

Gene

KIEE0824

Symbol

OR2A13P

Description

olfactory receptor, family 2, subfamily A, member 13 pseudogene

Original Clone ID

cp01224

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 804 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 268 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43671.1 3.1e-70 90.3 OR2A2 CCDS43668.1 7.1e-57 73.4 OR2A5 CCDS43672.1 2.3e-56 72.0 OR2A14 CCDS43670.1 2.7e-54 69.8 OR2A12 CCDS43673.1 3.6e-52 67.3 OR2A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 16 37 PR00237 GPCR IPR000725 49 60 PR00245 Olfactory receptor IPR000276 61 83 PR00237 GPCR IPR000725 86 98 PR00245 Olfactory receptor IPR000725 133 149 PR00245 Olfactory receptor IPR000276 156 179 PR00237 GPCR IPR000725 193 202 PR00245 Olfactory receptor IPR000276 229 255 PR00237 GPCR IPR000725 240 251 PR00245 Olfactory receptor HMMPfam IPR000276 3 247 PF00001 GPCR ProfileScan IPR017452 1 247 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 ICLDHILPTPMYFFLSHLAIIDM 28 PRIMARY 23 2 98 CTILALTSWSCGFALSLVHAILL 120 PRIMARY 23 3 158 ATCVFVLVGPLCLMLVSYMHILW 180 PRIMARY 23 4 199 SSHLCVVGLFFGIAMVVYIVPDS 221 PRIMARY 23 5 234 FHSVLNPILNPLIYSLRNAQVKG 256 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514321 317 608497 45.8 98.5 XP_011514322 317 608497 45.8 98.5 NP_036501 317 608497 45.8 98.5 NP_001005216 311 615016,615082 46.6 97.4 NP_009091 312 600578 44.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0824 Download

>KIEE0824  804 bp
ATGATCTTGGGACTCATCTGTCTGGACCACATTCTGCCTACCCCCATGTACTTCTTCCTC
TCACACCTGGCCATCATTGACATGTCCTATGCTTCCAACAATGTTCCCAAGATGTTGGCA
AATCTGATGAACAAGAAAAGAACCATCTCCTTTCTTCCATGCATAATGCAGACCTATTTG
CATTTCTCTTTTGCTGCTACAGAGTGTCTGATTTTGGTGGTGATGTCCTATGATAGGTAT
GTGGCCATTTGCCACCCTCTCCAGTACACTGTCATCATGAGCTGGAGAGTGTGCACGATC
CTGGCTCTCACATCCTGGTCATGTGGGTTTGCCCTGTCCCTGGTACATGCAATTCTTCTT
CTAAGGTTGCCGTTCTGTGGGCCCCGGGATGTGAACCACCTCTTCTGTGAAATTCTGTCT
GTCCTCAAGCTGGCCTGTTCTGACACCTGGGTTAACCAAGTGGTCATATTTGCTACCTGT
GTGTTTGTCTTAGTTGGACCTCTTTGTTTGATGCTTGTCTCCTACATGCACATCCTCTGG
GCCATCCTAAAGATCCAGACAAAGGAAGGCCGCATAAAGGCCTTCTCGACCTGCTCCTCC
CACCTGTGTGTGGTTGGACTCTTCTTTGGCATAGCCATGGTGGTTTACATAGTCCCAGAC
TCTAATCAACGAGAGGAGCAGGAGAAAATGCTGTCCCTGTTTCACAGTGTCTTGAACCCA
ATTCTGAACCCCCTGATCTACAGTCTGAGGAATGCTCAGGTGAAGGGCGCCCTCCACAGA
GCACTGCAGAGGACGCTGTCTATG

ORF Protein

Cloned ORF protein sequence for pFN21AE0824 Download

>KIEE0824  268 aa
MILGLICLDHILPTPMYFFLSHLAIIDMSYASNNVPKMLANLMNKKRTISFLPCIMQTYL
HFSFAATECLILVVMSYDRYVAICHPLQYTVIMSWRVCTILALTSWSCGFALSLVHAILL
LRLPFCGPRDVNHLFCEILSVLKLACSDTWVNQVVIFATCVFVLVGPLCLMLVSYMHILW
AILKIQTKEGRIKAFSTCSSHLCVVGLFFGIAMVVYIVPDSNQREEQEKMLSLFHSVLNP
ILNPLIYSLRNAQVKGALHRALQRTLSM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0824 Download

>pFN21AE0824  5509 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATCTTGGGACTCATCTGTCTGGACCACATTCT
GCCTACCCCCATGTACTTCTTCCTCTCACACCTGGCCATCATTGACATGTCCTATGCTTC
CAACAATGTTCCCAAGATGTTGGCAAATCTGATGAACAAGAAAAGAACCATCTCCTTTCT
TCCATGCATAATGCAGACCTATTTGCATTTCTCTTTTGCTGCTACAGAGTGTCTGATTTT
GGTGGTGATGTCCTATGATAGGTATGTGGCCATTTGCCACCCTCTCCAGTACACTGTCAT
CATGAGCTGGAGAGTGTGCACGATCCTGGCTCTCACATCCTGGTCATGTGGGTTTGCCCT
GTCCCTGGTACATGCAATTCTTCTTCTAAGGTTGCCGTTCTGTGGGCCCCGGGATGTGAA
CCACCTCTTCTGTGAAATTCTGTCTGTCCTCAAGCTGGCCTGTTCTGACACCTGGGTTAA
CCAAGTGGTCATATTTGCTACCTGTGTGTTTGTCTTAGTTGGACCTCTTTGTTTGATGCT
TGTCTCCTACATGCACATCCTCTGGGCCATCCTAAAGATCCAGACAAAGGAAGGCCGCAT
AAAGGCCTTCTCGACCTGCTCCTCCCACCTGTGTGTGGTTGGACTCTTCTTTGGCATAGC
CATGGTGGTTTACATAGTCCCAGACTCTAATCAACGAGAGGAGCAGGAGAAAATGCTGTC
CCTGTTTCACAGTGTCTTGAACCCAATTCTGAACCCCCTGATCTACAGTCTGAGGAATGC
TCAGGTGAAGGGCGCCCTCCACAGAGCACTGCAGAGGACGCTGTCTATGGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT