CADM4 ORF clone FHC04420

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC04420

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Clone info.

Species

human

Clone Name

pFN21AB7234 Sequence (with vector) Restriction Map

Product ID

FHC04420

Flexi Clone PID

FXC04420

ORF Sequence

DNA sequence (1164 bp)
Protein sequence (388 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528095]

Gene

KIBB7234

Symbol

CADM4

Alias : IGSF4C, NECL4, Necl-4, TSLL2, synCAM4

Description

cell adhesion molecule 4

Original Clone ID

oc00450

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1164 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 388 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12627.1 3.7e-109 100.0 CADM4 CCDS53711.1 2.5e-39 40.8 CADM1 CCDS54613.1 1.1e-33 39.5 CADM2 CCDS8373.1 3e-32 38.2 CADM1 CCDS73398.1 3.1e-32 37.3 CADM1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013106 28 117 PF07686 Immunoglobulin V-set IPR013162 130 206 PF08205 CD80-like IPR013098 227 304 PF07679 Immunoglobulin I-set HMMSmart IPR003599 29 121 SM00409 Immunoglobulin subtype IPR003599 130 221 SM00409 Immunoglobulin subtype IPR003598 136 206 SM00408 Immunoglobulin subtype 2 IPR003599 230 309 SM00409 Immunoglobulin subtype IPR003598 236 298 SM00408 Immunoglobulin subtype 2 IPR003585 344 362 SM00294 Neurexin/syndecan/glycophorin C ProfileScan IPR007110 124 219 PS50835 Immunoglobulin-like IPR007110 224 295 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 7 FQWPLLLLWAAAAGPGAGQEVQ 28 SECONDARY 22 2 323 YAIVGGILALLVFLIICVLVGMV 345 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_660339 388 609744 100.0 100.0 XP_016881941 369 609744 100.0 94.6 XP_005258677 345 609744 88.9 100.0 NP_001091987 414 605686 40.8 98.7 NP_001161147 404 609938 39.5 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7234 Download

>KIBB7234  1164 bp
ATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGCGGCGGGG
CCAGGGGCAGGACAGGAAGTACAGACAGAGAACGTGACAGTGGCTGAGGGTGGGGTGGCT
GAGATCACCTGCCGTCTGCACCAGTATGATGGGTCCATAGTTGTCATCCAGAACCCAGCC
CGGCAGACCCTCTTCTTCAATGGCACCCGTGCCTTGAAGGATGAGCGTTTCCAGCTTGAG
GAGTTCTCCCCACGCCGGGTGCGGATCCGGCTCTCAGATGCCCGCCTGGAGGACGAGGGG
GGCTATTTCTGCCAGCTCTACACAGAAGACACCCACCACCAGATTGCCACGCTCACGGTA
CTAGTGGCCCCAGAGAATCCTGTGGTGGAGGTCCGGGAGCAGGCGGTAGAGGGCGGCGAG
GTGGAGCTCAGCTGCCTCGTTCCGCGGTCCCGTCCGGCTGCCACCCTGCGCTGGTACCGG
GACCGCAAGGAGCTGAAAGGAGTGAGCAGCAGCCAGGAAAATGGCAAGGTCTGGAGCGTG
GCAAGCACAGTACGGTTTCGTGTGGACCGTAAGGACGACGGTGGTATCATCATCTGTGAG
GCGCAGAACCAGGCGCTGCCCTCCGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTG
CAGTACTCCCCCACGGCCCGGATTCATGCCTCCCAAGCTGTGGTGAGGGAGGGAGACACG
CTGGTGTTGACGTGTGCTGTCACGGGGAACCCCAGGCCAAACCAGATCCGCTGGAACCGC
GGGAATGAGTCTTTGCCGGAGAGGGCGGAGGCCGTGGGAGAGACGCTCACGCTGCCGGGT
CTGGTATCCGCGGATAACGGCACCTACACTTGCGAGGCGTCCAATAAGCACGGCCATGCG
AGGGCGCTCTACGTACTTGTGGTCTACGACCCTGGTGCGGTGGTAGAGGCTCAGACGTCG
GTTCCCTATGCCATTGTGGGCGGCATCCTGGCGCTGCTGGTGTTTCTGATCATATGTGTG
CTAGTGGGCATGGTCTGGTGCTCGGTACGGCAGAAGGGTTCCTATCTGACCCACGAAGCC
AGTGGCTTGGATGAACAGGGAGAAGCAAGAGAAGCCTTCCTCAATGGCAGCGACGGACAC
AAGAGGAAAGAGGAATTCTTCATC

ORF Protein

Cloned ORF protein sequence for pFN21AB7234 Download

>KIBB7234  388 aa
MGRARRFQWPLLLLWAAAAGPGAGQEVQTENVTVAEGGVAEITCRLHQYDGSIVVIQNPA
RQTLFFNGTRALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLYTEDTHHQIATLTV
LVAPENPVVEVREQAVEGGEVELSCLVPRSRPAATLRWYRDRKELKGVSSSQENGKVWSV
ASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGDT
LVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNGTYTCEASNKHGHA
RALYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGMVWCSVRQKGSYLTHEA
SGLDEQGEAREAFLNGSDGHKRKEEFFI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7234 Download

>pFN21AB7234  5869 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCT
GCTGCTGTGGGCGGCCGCGGCGGGGCCAGGGGCAGGACAGGAAGTACAGACAGAGAACGT
GACAGTGGCTGAGGGTGGGGTGGCTGAGATCACCTGCCGTCTGCACCAGTATGATGGGTC
CATAGTTGTCATCCAGAACCCAGCCCGGCAGACCCTCTTCTTCAATGGCACCCGTGCCTT
GAAGGATGAGCGTTTCCAGCTTGAGGAGTTCTCCCCACGCCGGGTGCGGATCCGGCTCTC
AGATGCCCGCCTGGAGGACGAGGGGGGCTATTTCTGCCAGCTCTACACAGAAGACACCCA
CCACCAGATTGCCACGCTCACGGTACTAGTGGCCCCAGAGAATCCTGTGGTGGAGGTCCG
GGAGCAGGCGGTAGAGGGCGGCGAGGTGGAGCTCAGCTGCCTCGTTCCGCGGTCCCGTCC
GGCTGCCACCCTGCGCTGGTACCGGGACCGCAAGGAGCTGAAAGGAGTGAGCAGCAGCCA
GGAAAATGGCAAGGTCTGGAGCGTGGCAAGCACAGTACGGTTTCGTGTGGACCGTAAGGA
CGACGGTGGTATCATCATCTGTGAGGCGCAGAACCAGGCGCTGCCCTCCGGACACAGCAA
GCAGACGCAGTACGTGCTGGATGTGCAGTACTCCCCCACGGCCCGGATTCATGCCTCCCA
AGCTGTGGTGAGGGAGGGAGACACGCTGGTGTTGACGTGTGCTGTCACGGGGAACCCCAG
GCCAAACCAGATCCGCTGGAACCGCGGGAATGAGTCTTTGCCGGAGAGGGCGGAGGCCGT
GGGAGAGACGCTCACGCTGCCGGGTCTGGTATCCGCGGATAACGGCACCTACACTTGCGA
GGCGTCCAATAAGCACGGCCATGCGAGGGCGCTCTACGTACTTGTGGTCTACGACCCTGG
TGCGGTGGTAGAGGCTCAGACGTCGGTTCCCTATGCCATTGTGGGCGGCATCCTGGCGCT
GCTGGTGTTTCTGATCATATGTGTGCTAGTGGGCATGGTCTGGTGCTCGGTACGGCAGAA
GGGTTCCTATCTGACCCACGAAGCCAGTGGCTTGGATGAACAGGGAGAAGCAAGAGAAGC
CTTCCTCAATGGCAGCGACGGACACAAGAGGAAAGAGGAATTCTTCATCGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT