SP6 ORF clone FHC03358

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03358

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Clone info.

Species

human

Clone Name

pFN21AB9848 Sequence (with vector) Restriction Map

Product ID

FHC03358

Flexi Clone PID

FXC03358

ORF Sequence

DNA sequence (1128 bp)
Protein sequence (376 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464709]

Gene

KIBB9848

Symbol

SP6

Alias : EPFN, EPIPROFIN, KLF14

Description

Sp6 transcription factor

Original Clone ID

cp00417

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1128 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 376 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11520.1 3.6e-80 100.0 SP6 CCDS73475.1 2.2e-20 40.7 SP7 CCDS44897.1 2.3e-20 40.7 SP7 CCDS5372.1 1.4e-18 45.0 SP8 CCDS43555.1 1.4e-18 45.0 SP8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 284 308 PF00096 Zinc finger IPR007087 314 336 PF00096 Zinc finger HMMSmart IPR015880 254 278 SM00355 Zinc finger IPR015880 284 308 SM00355 Zinc finger IPR015880 314 336 SM00355 Zinc finger ProfileScan IPR007087 254 283 PS50157 Zinc finger IPR007087 284 313 PS50157 Zinc finger IPR007087 314 341 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006722178 376 608613 100.0 100.0 NP_954871 376 608613 100.0 100.0 NP_001245177 376 608613 100.0 100.0 XP_011536202 413 606633,613849 40.7 98.1 NP_001287766 413 606633,613849 40.7 98.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9848 Download

>KIBB9848  1128 bp
ATGCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCC
CCGCCGCGCCTCGACCTGCAGCCTCTCCAAACTTACCAGGGCCACACGAGCCCTGAGGCC
GGGGACTACCCCTCCCCGCTGCAGCCTGGAGAGCTGCAGAGCCTCCCGCTGGGCCCGGAG
GTGGACTTCTCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGGGTAACCTGCGAGGAC
CTGGAAAGCGACAGTCCCTTGGCCCCGGGCCCCTTTTCCAAGCTCCTGCAGCCGGACATG
TCACACCATTATGAATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGCTCGTGG
TGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGACC
TCACCTGGCCACCCGGGGGCGCTTCAGGCGGGCTTGGGGGGCTACGTCGGAGACCACCAG
CTTTGTGCCCCGCCACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGCCGGAGGGCAG
CATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTTGGAAGTAGCCGCCCCGGAGTCTCAA
GGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGTCGGTGCCC
CGCAGCTCAGGCCAGACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGGAGCGACTGGGG
GCTCCATGTGGGCCCGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCACATCCCGGGC
TGCGGGAAAGCCTACGCCAAGACGTCGCACCTGAAGGCGCACCTGCGCTGGCACAGCGGC
GACCGTCCCTTCGTGTGCAACTGGCTCTTCTGCGGCAAGCGCTTCACGCGCTCGGACGAG
CTGCAGCGCCACCTCCAGACCCACACCGGCACCAAGAAGTTCCCCTGTGCAGTCTGCAGC
CGCGTCTTCATGCGCAGCGACCACCTGGCCAAGCACATGAAAACCCACGAGGGCGCCAAG
GAGGAGGCGGCTGGGGCGGCCTCGGGAGAGGGCAAGGCCGGCGGCGCAGTGGAGCCCCCC
GGGGGCAAAGGCAAACGCGAGGCCGAGGGCAGCGTGGCTCCCTCCAAC

ORF Protein

Cloned ORF protein sequence for pFN21AB9848 Download

>KIBB9848  376 aa
MLTAVCGSLGSQHTEAPHASPPRLDLQPLQTYQGHTSPEAGDYPSPLQPGELQSLPLGPE
VDFSQGYELPGASSRVTCEDLESDSPLAPGPFSKLLQPDMSHHYESWFRPTHPGAEDGSW
WDLHPGTSWMDLPHTQGALTSPGHPGALQAGLGGYVGDHQLCAPPPHPHAHHLLPAAGGQ
HLLGPPDGAKALEVAAPESQGLDSSLDGAARPKGSRRSVPRSSGQTVCRCPNCLEAERLG
APCGPDGGKKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDE
LQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTHEGAKEEAAGAASGEGKAGGAVEPP
GGKGKREAEGSVAPSN

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9848 Download

>pFN21AB9848  5833 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCA
GCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGACCTGCAGCCTCTCCAAACTTA
CCAGGGCCACACGAGCCCTGAGGCCGGGGACTACCCCTCCCCGCTGCAGCCTGGAGAGCT
GCAGAGCCTCCCGCTGGGCCCGGAGGTGGACTTCTCGCAGGGCTATGAGCTGCCAGGGGC
CTCCTCGCGGGTAACCTGCGAGGACCTGGAAAGCGACAGTCCCTTGGCCCCGGGCCCCTT
TTCCAAGCTCCTGCAGCCGGACATGTCACACCATTATGAATCGTGGTTCAGGCCGACTCA
CCCAGGCGCGGAGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCT
CCCCCACACTCAGGGCGCGCTGACCTCACCTGGCCACCCGGGGGCGCTTCAGGCGGGCTT
GGGGGGCTACGTCGGAGACCACCAGCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCA
CCTCCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTT
GGAAGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCC
CAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGTCGCTGCCCCAA
CTGTCTGGAGGCGGAGCGACTGGGGGCTCCATGTGGGCCCGATGGGGGCAAGAAGAAGCA
TTTGCACAACTGCCACATCCCGGGCTGCGGGAAAGCCTACGCCAAGACGTCGCACCTGAA
GGCGCACCTGCGCTGGCACAGCGGCGACCGTCCCTTCGTGTGCAACTGGCTCTTCTGCGG
CAAGCGCTTCACGCGCTCGGACGAGCTGCAGCGCCACCTCCAGACCCACACCGGCACCAA
GAAGTTCCCCTGTGCAGTCTGCAGCCGCGTCTTCATGCGCAGCGACCACCTGGCCAAGCA
CATGAAAACCCACGAGGGCGCCAAGGAGGAGGCGGCTGGGGCGGCCTCGGGAGAGGGCAA
GGCCGGCGGCGCAGTGGAGCCCCCCGGGGGCAAAGGCAAACGCGAGGCCGAGGGCAGCGT
GGCTCCCTCCAACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT