LRIT1 ORF clone FHC02321

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02321

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Clone info.

Species

human

Clone Name

pFN21AB7203 Sequence (with vector) Restriction Map

Product ID

FHC02321

Flexi Clone PID

FXC02321

ORF Sequence

DNA sequence (1869 bp)
Protein sequence (623 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463829]

Gene

KIBB7203

Symbol

LRIT1

Alias : FIGLER9, LRRC21, PAL

Description

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1

Original Clone ID

oc00419

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1869 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 623 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7373.1 3.4e-186 100.0 LRIT1 CCDS3688.3 1.9e-42 35.8 LRIT3 CCDS31234.1 3.7e-25 29.1 LRIT2 CCDS60581.1 6.1e-21 29.3 LRIT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 156 173 PF00560 Leucine-rich repeat IPR013098 267 345 PF07679 Immunoglobulin I-set IPR003961 432 499 PF00041 Fibronectin HMMSmart IPR003591 82 105 SM00369 Leucine-rich repeat IPR003591 106 129 SM00369 Leucine-rich repeat IPR003591 131 153 SM00369 Leucine-rich repeat IPR003591 154 177 SM00369 Leucine-rich repeat IPR000483 201 252 SM00082 Cysteine-rich flanking region IPR003599 260 346 SM00409 Immunoglobulin subtype IPR003598 266 335 SM00408 Immunoglobulin subtype 2 ProfileScan IPR001611 84 105 PS51450 Leucine-rich repeat IPR001611 132 153 PS51450 Leucine-rich repeat IPR001611 156 177 PS51450 Leucine-rich repeat IPR007110 254 346 PS50835 Immunoglobulin-like IPR003961 427 519 PS50853 Fibronectin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MRVALGMLWLLALAWPPQARGF 22 SECONDARY 22 2 493 KYVACVCVQGLVPR 506 SECONDARY 14 3 529 NVVVISVAIVIALPLTLLVCCSA 551 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056428 623 616103 100.0 100.0 XP_011537925 574 616103 100.0 92.1 NP_940908 679 615004,615058 35.8 89.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7203 Download

>KIBB7203  1869 bp
ATGAGGGTGGCATTAGGCATGCTCTGGCTCTTGGCCCTTGCGTGGCCCCCCCAGGCCCGG
GGCTTCTGCCCCTCTCAATGCAGCTGCAGCCTCCATATCATGGGTGATGGCAGCAAGGCC
AGGACAGTAGTGTGCAACGACCCCGACATGACCCTGCCCCCGGCGTCCATCCCCCCGGAC
ACCTCCAGACTGCGCCTGGAGCGGACGGCCATACGCAGGGTTCCTGGCGAGGCCTTCAGG
CCCCTGGGCCGCCTGGAGCAGCTGTGGCTGCCTTACAACGCCCTCAGCGAGCTCAACGCC
CTCATGCTGCGGGGCCTGCGACGCCTGCGGGAGCTGCGGCTGCCCGGGAACCGCCTGGCC
GCCTTCCCCTGGGCGGCGCTCAGGGACGCCCCCAAGCTGCGGCTGCTGGACCTGCAGGCC
AACCGCCTCTCGGCTGTGCCCGCTGAGGCCGCGCGCTTCCTGGAGAACCTCACCTTCCTC
GACCTCTCCAGCAACCAGCTGATGAGGCTCCCGCAGGAGCTCATCGTCTCCTGGGCTCAC
CTGGAGACCGGTATCTTTCCTCCCGGCCACCACCCCAGGCGGGTCCTAGGGCTACAGGAC
AACCCCTGGGCATGTGACTGCCGACTCTATGACCTGGTTCATCTTTTGGATGGCTGGGCC
CCAAACTTGGCCTTCATTGAGACTGAACTGAGATGTGCCAGCCCACGTAGCCTGGCCGGA
GTGGCCTTCAGCCAGCTTGAACTGAGGAAGTGCCAGGGCCCAGAGCTCCATCCAGGAGTG
GCCAGCATCAGGTCCCTTTTGGGTGGCACAGCACTGCTACGCTGTGGAGCTACTGGAGTC
CCTGGGCCCGAGATGAGCTGGAGGAGGGCCAATGGCAGGCCCCTTAATGGTACAGTGCAC
CAGGAAGTCTCCAGTGACGGCACGAGCTGGACTCTGCTGGGCCTGCCTGCAGTGTCCCAC
CTTGACTCCGGAGACTACATCTGCCAAGCCAAGAACTTCCTGGGAGCCTCTGAAACTGTT
ATCTCCTTGATTGTCACTGAGCCACCGACTTCCACAGAACACAGTGGGAGCCCAGGAGCA
CTATGGGCAAGGACAGGTGGCGGAGGGGAAGCTGCTGCTTACAACAACAAGCTGGTGGCC
AGGCATGTCCCCCAGATTCCCAAACCCGCTGTCCTGGCCACTGGACCCTCTGTGCCCAGC
ACAAAGGAGGAGCTGACCCTTGAGCACTTCCAGATGGATGCCCTGGGAGAGCTCTCTGAT
GGGCGGGCAGGACCCTCAGAGGCACGAATGGTGAGGTCTGTGAAGGTGGTGGGGGACACT
TACCACAGCGTGTCCTTGGTGTGGAAGGCACCCCAGGCTAAGAACACAACTGCCTTCAGT
GTCCTCTACGCGGTCTTTGGGCAGCACAGCATGCGGCGGGTGATTGTGCAGCCTGGGAAG
ACCAGAGTGACCATCACTGGGCTGTTGCCCAAGACCAAGTATGTGGCGTGTGTCTGTGTG
CAGGGCCTGGTGCCCCGGAAGGAGCAGTGTGTTATTTTCTCCACCAATGAAGTGGTGGAT
GCTGAGAACACTCAGCAGCTTATCAATGTGGTGGTGATCAGTGTGGCCATCGTCATTGCC
CTGCCTCTCACGCTGCTTGTCTGCTGCAGTGCTCTTCAGAAGCGCTGCCGAAAGTGCTTC
AACAAGGACTCCACTGAGGCCACAGTTACCTACGTCAACCTAGAGAGACTGGGCTACAGC
GAGGACGGCTTGGAGGAGCTGTCCCGGCACAGTGTCAGCGAGGCTGACAGGCTTCTCTCA
GCTCGTTCCAGTGTGGACTTTCAGGCCTTTGGAGTCAAAGGGGGCAGGAGAATCAATGAG
TACTTCTGC

ORF Protein

Cloned ORF protein sequence for pFN21AB7203 Download

>KIBB7203  623 aa
MRVALGMLWLLALAWPPQARGFCPSQCSCSLHIMGDGSKARTVVCNDPDMTLPPASIPPD
TSRLRLERTAIRRVPGEAFRPLGRLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLA
AFPWAALRDAPKLRLLDLQANRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVSWAH
LETGIFPPGHHPRRVLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETELRCASPRSLAG
VAFSQLELRKCQGPELHPGVASIRSLLGGTALLRCGATGVPGPEMSWRRANGRPLNGTVH
QEVSSDGTSWTLLGLPAVSHLDSGDYICQAKNFLGASETVISLIVTEPPTSTEHSGSPGA
LWARTGGGGEAAAYNNKLVARHVPQIPKPAVLATGPSVPSTKEELTLEHFQMDALGELSD
GRAGPSEARMVRSVKVVGDTYHSVSLVWKAPQAKNTTAFSVLYAVFGQHSMRRVIVQPGK
TRVTITGLLPKTKYVACVCVQGLVPRKEQCVIFSTNEVVDAENTQQLINVVVISVAIVIA
LPLTLLVCCSALQKRCRKCFNKDSTEATVTYVNLERLGYSEDGLEELSRHSVSEADRLLS
ARSSVDFQAFGVKGGRRINEYFC

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7203 Download

>pFN21AB7203  6574 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGGGTGGCATTAGGCATGCTCTGGCTCTTGGC
CCTTGCGTGGCCCCCCCAGGCCCGGGGCTTCTGCCCCTCTCAATGCAGCTGCAGCCTCCA
TATCATGGGTGATGGCAGCAAGGCCAGGACAGTAGTGTGCAACGACCCCGACATGACCCT
GCCCCCGGCGTCCATCCCCCCGGACACCTCCAGACTGCGCCTGGAGCGGACGGCCATACG
CAGGGTTCCTGGCGAGGCCTTCAGGCCCCTGGGCCGCCTGGAGCAGCTGTGGCTGCCTTA
CAACGCCCTCAGCGAGCTCAACGCCCTCATGCTGCGGGGCCTGCGACGCCTGCGGGAGCT
GCGGCTGCCCGGGAACCGCCTGGCCGCCTTCCCCTGGGCGGCGCTCAGGGACGCCCCCAA
GCTGCGGCTGCTGGACCTGCAGGCCAACCGCCTCTCGGCTGTGCCCGCTGAGGCCGCGCG
CTTCCTGGAGAACCTCACCTTCCTCGACCTCTCCAGCAACCAGCTGATGAGGCTCCCGCA
GGAGCTCATCGTCTCCTGGGCTCACCTGGAGACCGGTATCTTTCCTCCCGGCCACCACCC
CAGGCGGGTCCTAGGGCTACAGGACAACCCCTGGGCATGTGACTGCCGACTCTATGACCT
GGTTCATCTTTTGGATGGCTGGGCCCCAAACTTGGCCTTCATTGAGACTGAACTGAGATG
TGCCAGCCCACGTAGCCTGGCCGGAGTGGCCTTCAGCCAGCTTGAACTGAGGAAGTGCCA
GGGCCCAGAGCTCCATCCAGGAGTGGCCAGCATCAGGTCCCTTTTGGGTGGCACAGCACT
GCTACGCTGTGGAGCTACTGGAGTCCCTGGGCCCGAGATGAGCTGGAGGAGGGCCAATGG
CAGGCCCCTTAATGGTACAGTGCACCAGGAAGTCTCCAGTGACGGCACGAGCTGGACTCT
GCTGGGCCTGCCTGCAGTGTCCCACCTTGACTCCGGAGACTACATCTGCCAAGCCAAGAA
CTTCCTGGGAGCCTCTGAAACTGTTATCTCCTTGATTGTCACTGAGCCACCGACTTCCAC
AGAACACAGTGGGAGCCCAGGAGCACTATGGGCAAGGACAGGTGGCGGAGGGGAAGCTGC
TGCTTACAACAACAAGCTGGTGGCCAGGCATGTCCCCCAGATTCCCAAACCCGCTGTCCT
GGCCACTGGACCCTCTGTGCCCAGCACAAAGGAGGAGCTGACCCTTGAGCACTTCCAGAT
GGATGCCCTGGGAGAGCTCTCTGATGGGCGGGCAGGACCCTCAGAGGCACGAATGGTGAG
GTCTGTGAAGGTGGTGGGGGACACTTACCACAGCGTGTCCTTGGTGTGGAAGGCACCCCA
GGCTAAGAACACAACTGCCTTCAGTGTCCTCTACGCGGTCTTTGGGCAGCACAGCATGCG
GCGGGTGATTGTGCAGCCTGGGAAGACCAGAGTGACCATCACTGGGCTGTTGCCCAAGAC
CAAGTATGTGGCGTGTGTCTGTGTGCAGGGCCTGGTGCCCCGGAAGGAGCAGTGTGTTAT
TTTCTCCACCAATGAAGTGGTGGATGCTGAGAACACTCAGCAGCTTATCAATGTGGTGGT
GATCAGTGTGGCCATCGTCATTGCCCTGCCTCTCACGCTGCTTGTCTGCTGCAGTGCTCT
TCAGAAGCGCTGCCGAAAGTGCTTCAACAAGGACTCCACTGAGGCCACAGTTACCTACGT
CAACCTAGAGAGACTGGGCTACAGCGAGGACGGCTTGGAGGAGCTGTCCCGGCACAGTGT
CAGCGAGGCTGACAGGCTTCTCTCAGCTCGTTCCAGTGTGGACTTTCAGGCCTTTGGAGT
CAAAGGGGGCAGGAGAATCAATGAGTACTTCTGCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT