ZSCAN26 ORF clone FHC02200

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02200

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Clone info.

Species

human

Clone Name

pFN21AB5497 Sequence (with vector) Restriction Map

Product ID

FHC02200

Flexi Clone PID

FXC02200

Original Clone PID

ORK02200

ORF Sequence

DNA sequence (1437 bp)
Protein sequence (479 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463363]

Gene

KIBB5497

Symbol

ZSCAN26

Alias : SRE-ZBP, SREZBP, ZNF187

Description

zinc finger and SCAN domain containing 26, transcript variant a

Original Clone ID

ef00872

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1437 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 479 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS78119.1 1.9e-116 99.8 ZSCAN26 CCDS75414.1 3.3e-83 99.7 ZSCAN26 CCDS75415.1 2.1e-66 100.0 ZSCAN26 CCDS4650.1 1.6e-33 41.3 ZKSCAN3 CCDS4645.1 7.2e-33 42.6 ZKSCAN8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 47 139 PF02023 Transcription regulator SCAN IPR007087 283 305 PF00096 Zinc finger IPR007087 311 333 PF00096 Zinc finger IPR007087 395 417 PF00096 Zinc finger HMMSmart IPR003309 47 160 SM00431 Transcription regulator SCAN IPR015880 232 254 SM00355 Zinc finger IPR015880 283 305 SM00355 Zinc finger IPR015880 311 333 SM00355 Zinc finger IPR015880 339 361 SM00355 Zinc finger IPR015880 367 389 SM00355 Zinc finger IPR015880 395 417 SM00355 Zinc finger IPR015880 423 445 SM00355 Zinc finger IPR015880 451 473 SM00355 Zinc finger ProfileScan IPR003309 52 133 PS50804 Transcription regulator SCAN IPR007087 232 259 PS50157 Zinc finger IPR007087 283 310 PS50157 Zinc finger IPR007087 311 338 PS50157 Zinc finger IPR007087 339 366 PS50157 Zinc finger IPR007087 367 394 PS50157 Zinc finger IPR007087 395 422 PS50157 Zinc finger IPR007087 423 450 PS50157 Zinc finger IPR007087 451 478 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001018854 479 616474 100.0 100.0 XP_011513164 479 616474 100.0 100.0 XP_016866753 478 616474 99.8 100.0 NP_001104509 478 616474 99.8 100.0 XP_011513166 450 616474 100.0 92.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5497 Download

>KIBB5497  1437 bp
ATGGCAACAGCATTGGTGAGTGCCCATTCCCTGGCTCCCCTGAATCTGAAGAAGGAGGGG
CTTCGGGTAGTGAGGGAGGATCACTACTCTACTTGGGAACAGGGATTCAAGCTGCAAGGA
AACAGTAAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAA
GAGACCACAGGACCTCGAGAAGCACTAAGTCGGCTCCGGGAGCTCTGTCAACAGTGGCTA
CAGCCCGAGACCCATACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTTCTG
ATCATCCTGCCTAAGGAGCTCCAGGCCCGGGTGCAGGAGCATCACCCAGAGAGCAGGGAG
GACGTGGTTGTTGTTCTGGAGGATTTGCAGCTGGATCTTGGAGAAACAGGACAACAGGTG
GACCCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAGGAGATGGCCCCTCTGAAAGGA
GTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTACAAAGCCTGAGAAAGAGAAGGGT
GAGGAGACAAGGATTGAGAATGGGAAGCTTATTGTAGTAACAGACTCTTGTGGAAGAGTA
GAGTCATCTGGGAAAATATCTGAACCCATGGAGGCTCATAATGAGGGCTCTAACTTGGAA
AGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA
TTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGGAAAGAAACTCTGC
GAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAAGTCCTCTCTAGAGAG
AAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTTTCAGAGGAGTTCACACCTCGTCAGA
CATCAGAAAATCCATCTTGGTGAGAAGCCTTATCAGTGCAATGAGTGTGGCAAAGTCTTT
AGCCAGAATGCAGGCCTTTTGGAACATCTCAGAATTCATACTGGAGAGAAACCTTATCTA
TGTATCCATTGTGGAAAAAATTTTAGGCGCAGCTCTCACCTTAATCGACATCAGAGAATT
CACAGTCAGGAGGAGCCCTGTGAGTGCAAGGAGTGTGGAAAAACCTTTAGTCAGGCCTTA
CTCCTCACCCACCATCAGAGAATCCATAGTCACTCCAAAAGCCATCAATGTAACGAGTGT
GGAAAAGCTTTCAGTTTGACCTCAGACCTTATTCGACACCACAGAATTCATACTGGAGAA
AAACCTTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACTAAACTCACACCTTGCTCAG
CATGTAAGAATCCACAATGAAGAAAAACCCTATCAGTGTAGTGAATGTGGAGAAGCCTTC
AGGCAAAGGTCAGGTCTTTTTCAACATCAGAGATATCACCACAAAGACAAACTGGCT

ORF Protein

Cloned ORF protein sequence for pFN21AB5497 Download

>KIBB5497  479 aa
MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE
ETTGPREALSRLRELCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQEHHPESRE
DVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKG
EETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQR
FIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVR
HQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRI
HSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGE
KPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5497 Download

>pFN21AB5497  6142 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCAACAGCATTGGTGAGTGCCCATTCCCTGGC
TCCCCTGAATCTGAAGAAGGAGGGGCTTCGGGTAGTGAGGGAGGATCACTACTCTACTTG
GGAACAGGGATTCAAGCTGCAAGGAAACAGTAAAGGCCTTGGACAGGAGCCATTGTGCAA
ACAATTCAGGCAGTTGCGTTATGAAGAGACCACAGGACCTCGAGAAGCACTAAGTCGGCT
CCGGGAGCTCTGTCAACAGTGGCTACAGCCCGAGACCCATACCAAGGAGCAGATCCTGGA
GCTGCTGGTGCTGGAGCAGTTTCTGATCATCCTGCCTAAGGAGCTCCAGGCCCGGGTGCA
GGAGCATCACCCAGAGAGCAGGGAGGACGTGGTTGTTGTTCTGGAGGATTTGCAGCTGGA
TCTTGGAGAAACAGGACAACAGGTGGACCCAGACCAGCCAAAGAAACAAAAAATACTTGT
GGAGGAGATGGCCCCTCTGAAAGGAGTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGT
TACAAAGCCTGAGAAAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGAAGCTTATTGT
AGTAACAGACTCTTGTGGAAGAGTAGAGTCATCTGGGAAAATATCTGAACCCATGGAGGC
TCATAATGAGGGCTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGTA
TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAG
TACACACACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGG
ACATAAGAAAGTCCTCTCTAGAGAGAAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTT
TCAGAGGAGTTCACACCTCGTCAGACATCAGAAAATCCATCTTGGTGAGAAGCCTTATCA
GTGCAATGAGTGTGGCAAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACATCTCAGAAT
TCATACTGGAGAGAAACCTTATCTATGTATCCATTGTGGAAAAAATTTTAGGCGCAGCTC
TCACCTTAATCGACATCAGAGAATTCACAGTCAGGAGGAGCCCTGTGAGTGCAAGGAGTG
TGGAAAAACCTTTAGTCAGGCCTTACTCCTCACCCACCATCAGAGAATCCATAGTCACTC
CAAAAGCCATCAATGTAACGAGTGTGGAAAAGCTTTCAGTTTGACCTCAGACCTTATTCG
ACACCACAGAATTCATACTGGAGAAAAACCTTTCAAGTGTAACATATGCCAGAAAGCCTT
CCGACTAAACTCACACCTTGCTCAGCATGTAAGAATCCACAATGAAGAAAAACCCTATCA
GTGTAGTGAATGTGGAGAAGCCTTCAGGCAAAGGTCAGGTCTTTTTCAACATCAGAGATA
TCACCACAAAGACAAACTGGCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT