SNPH ORF clone FHC01972

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC01972

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Clone info.

Species

human

Clone Name

pFN21AA0374 Sequence (with vector) Restriction Map

Product ID

FHC01972

Flexi Clone PID

FXC01972

ORF Sequence

DNA sequence (1614 bp)
Protein sequence (538 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463298]

Gene

KIAA0374

Symbol

SNPH

Description

syntaphilin

Original Clone ID

hh00327

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1614 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 538 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS82590.1 2.6e-134 100.0 SNPH CCDS13012.1 5.8e-122 100.0 SNPH CCDS83315.1 5.3e-28 41.8 SYBU CCDS55271.1 5.4e-28 41.8 SYBU CCDS43764.1 6.3e-28 41.8 SYBU The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 468 HYIVDLLAVVVPAVPTVAWLCR 489 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001305163 538 604942 100.0 100.0 NP_055538 494 604942 100.0 91.8 XP_005260946 527 604942 93.7 91.8 XP_011527706 527 604942 93.7 91.8 XP_011527705 571 604942 94.2 99.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA0374 Download

>KIAA0374  1614 bp
ATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTGGCCTGGCCCGGCCCTTTCTGCGGGC
CCCCCAACCCGCCCTCTCTCCTCAGCCCCCGGGATACCGCCCATCCCACCCCTTACTCGG
ACCCACAGCCTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACCTCTGCTGGATCACGC
AGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCTACGGCACCTCTTCGCTCAGCAGC
AGCAGCAATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCATG
AAATACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCTG
ACCCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCTGAAGGACACA
CAGGACCGGCTCCAGGACCGGGACACAGAGATTGATGACCTGAAGACGCAGCTGTCACGC
ATGCAGGAGGACTGGATTGAGGAGGAGTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAG
GAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTG
ATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAAG
CTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGC
ACTGGGGAGTCAGCCGGTGGGTCCCCTGCCCGCTCCCTCACCCGCAGCTCCACCTACACC
AAGCTGAGTGACCCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCT
GCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGAC
GCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCG
CTGCACAGCTCCTTCGGCCTGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTG
CTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACA
GACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCAGGCCCAG
GTCTGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCAGAGCTGGATGCCCACCCTTCA
GGGCCCAGAGACCCCAACTCAGCAGTGGTGGTGACAGTGGGTGATGAGCTAGAGGCCCCA
GAGCCCATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCAG
TCGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAG
CCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGCTGGCTGTGGTGGTGCCGGCC
GTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATCTACAAC
ATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGC
TGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCCAGCGGGCGGCGGCTCCCAGCTC

ORF Protein

Cloned ORF protein sequence for pFN21AA0374 Download

>KIAA0374  538 aa
MPGSGPSERMTWPGPALSAGPPTRPLSSAPGIPPIPPLTRTHSLMAMSLPGSRRTSAGSR
RRTSPPVSVRDAYGTSSLSSSSNSGSYKGSDSSPTPRRSMKYTLCSDNHGIKPPTPEQYL
TPLQQKEVCIRHLKARLKDTQDRLQDRDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALK
EARKEIKQLKQVIDTVKNNLIDKDKGLQKYFVDINIQNKKLETLLHSMEVAQNGMAKEDG
TGESAGGSPARSLTRSSTYTKLSDPAVCGDRQPGDPSSGSAEDGADSGFAAADDTLSRTD
ALEASSLLSSGVDCGTEETSLHSSFGLGPRFPASNTYEKLLCGMEAGVQASCMQERAIQT
DFVQYQPDLDTILEKVTQAQVCGTDPESGDRCPELDAHPSGPRDPNSAVVVTVGDELEAP
EPITRGPTPQRPGANPNPGQSVSVVCPMEEEEEAAVAEKEPKSYWSRHYIVDLLAVVVPA
VPTVAWLCRSQRRQGQPIYNISSLLRGCCTVALHSIRRISCRSLSQPSPSPAGGGSQL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA0374 Download

>pFN21AA0374  6319 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTG
GCCTGGCCCGGCCCTTTCTGCGGGCCCCCCAACCCGCCCTCTCTCCTCAGCCCCCGGGAT
ACCGCCCATCCCACCCCTTACTCGGACCCACAGCCTCATGGCCATGTCCCTGCCAGGAAG
TAGACGGACCTCTGCTGGATCACGCAGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGC
CTACGGCACCTCTTCGCTCAGCAGCAGCAGCAATTCTGGCTCCTACAAGGGCAGTGACAG
CAGTCCCACGCCAAGGCGCTCCATGAAATACACGCTGTGCAGTGACAACCATGGCATCAA
GCCCCCGACCCCGGAGCAGTACCTGACCCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCA
CCTGAAAGCCCGGCTGAAGGACACACAGGACCGGCTCCAGGACCGGGACACAGAGATTGA
TGACCTGAAGACGCAGCTGTCACGCATGCAGGAGGACTGGATTGAGGAGGAGTGCCACCG
CGTGGAGGCCCAGCTGGCCCTGAAGGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGT
CATCGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGT
GGACATCAACATCCAGAACAAGAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCA
GAATGGCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCTGCCCGCTC
CCTCACCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGGCTGTCTGTGGTGACCGCCA
GCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGC
CGATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGT
GGACTGTGGCACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCTGGGCCCCCGCTTCCC
TGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTG
CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCAT
CCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGACCCTGAGTCAGGGGACAGGTG
CCCAGAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGTGAC
AGTGGGTGATGAGCTAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCCCACAGCGGCC
TGGTGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGA
GGAGGCTGCCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCCGCCACTACATCGTGGA
TCTGCTGGCTGTGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCG
GCGCCAGGGCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGC
CTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCCAGC
GGGCGGCGGCTCCCAGCTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT