LYSMD3 ORF clone FXC11055

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Flexi ORF Clone FXC11055

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Clone info.

Species

human

Clone Name

pF1KE0440 Sequence (with vector) Restriction Map

Product ID

FXC11055

HaloTag Clone PID

FHC11055

ORF Sequence

DNA sequence (918 bp)
Protein sequence (306 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528830]

Gene

KIEE0440

Symbol

LYSMD3

Description

LysM, putative peptidoglycan-binding, domain containing 3, transcript variant 1

Original Clone ID

oc01140

Features of the cloned ORF sequence

Description

Length: 918 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 306 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43338.1 9.6e-133 99.7 LYSMD3 CCDS68911.1 1.9e-33 100.0 LYSMD3 CCDS66877.1 1.6e-14 34.8 LYSMD4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018392 69 103 PF01476 Peptidoglycan-binding lysin domain HMMSmart IPR002482 66 110 SM00257 Peptidoglycan-binding Lysin subgroup
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 222 VVIMLIVGIITPVFYLLYYAILA 244 PRIMARY 23 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0440 Download

>KIEE0440  918 bp
ATGGCAGGGAGGCATCAGAATCGTAGTTTTCCTCTTCCAGGAGTTCAGTCAAGTGGTCAA
GTACATGCATTTGGAAATTGTTCAGACAGTGATATTTTGGAGGAGGATGCTGAAGTGTAT
GAGCTTCGATCCAGAGGAAAAGAGAAAGTCCGAAGAAGTACATCAAGAGATAGACTTGAC
GACATTATAGTATTAACAAAAGATATACAAGAAGGAGATACATTAAATGCAATAGCCCTT
CAGTACTGTTGTACGGTAGCAGATATCAAGAGAGTTAACAATCTCATCAGTGATCAAGAC
TTTTTTGCCCTTAGGTCTATCAAAATTCCAGTAAAAAAGTTCAGTTCCTTGACCGAAACA
CTTTGTCCTCCAAAAGGAAGACAGACTTCACGTCATTCATCTGTTCAATACTCTTCCGAA
CAACAGGAAATTTTGCCAGCTAATGATTCTCTTGCTTACAGTGACTCAGCTGGTAGCTTT
TTAAAAGAAGTAGACCGAGACATAGAACAAATAGTAAAGTGTACAGACAATAAGAGAGAG
AACCTCAATGAGGTAGTATCGGCCTTAACAGCACAACAAATGCGTTTTGAACCTGATAAC
AAAAACACTCAACGTAAAGACCCCTATTATGGAGCAGACTGGGGAATAGGGTGGTGGACA
GCTGTAGTGATAATGTTGATAGTAGGTATAATAACACCAGTGTTTTATTTGTTGTATTAT
GCAATTTTAGCTAAGGTGGATGTTAGTCATCATTCAACAGTGGACTCTTCACATTTACAT
TCAAAAATCACACCCCCATCACAGCAGAGAGAAATGGAAAATGGAATTGTGCCAACTAAA
GGAATACATTTCAGCCAACAAGATGATCATAAACTGTATAGTCAAGATTCTCAGTCACCT
GCTGCTCAACAGGAAACA

ORF Protein

Cloned ORF protein sequence for pF1KE0440 Download

>KIEE0440  306 aa
MAGRHQNRSFPLPGVQSSGQVHAFGNCSDSDILEEDAEVYELRSRGKEKVRRSTSRDRLD
DIIVLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTET
LCPPKGRQTSRHSSVQYSSEQQEILPANDSLAYSDSAGSFLKEVDRDIEQIVKCTDNKRE
NLNEVVSALTAQQMRFEPDNKNTQRKDPYYGADWGIGWWTAVVIMLIVGIITPVFYLLYY
AILAKVDVSHHSTVDSSHLHSKITPPSQQREMENGIVPTKGIHFSQQDDHKLYSQDSQSP
AAQQET

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0440 Download

>pF1KE0440  4031 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAGGGAGG
CATCAGAATCGTAGTTTTCCTCTTCCAGGAGTTCAGTCAAGTGGTCAAGTACATGCATTT
GGAAATTGTTCAGACAGTGATATTTTGGAGGAGGATGCTGAAGTGTATGAGCTTCGATCC
AGAGGAAAAGAGAAAGTCCGAAGAAGTACATCAAGAGATAGACTTGACGACATTATAGTA
TTAACAAAAGATATACAAGAAGGAGATACATTAAATGCAATAGCCCTTCAGTACTGTTGT
ACGGTAGCAGATATCAAGAGAGTTAACAATCTCATCAGTGATCAAGACTTTTTTGCCCTT
AGGTCTATCAAAATTCCAGTAAAAAAGTTCAGTTCCTTGACCGAAACACTTTGTCCTCCA
AAAGGAAGACAGACTTCACGTCATTCATCTGTTCAATACTCTTCCGAACAACAGGAAATT
TTGCCAGCTAATGATTCTCTTGCTTACAGTGACTCAGCTGGTAGCTTTTTAAAAGAAGTA
GACCGAGACATAGAACAAATAGTAAAGTGTACAGACAATAAGAGAGAGAACCTCAATGAG
GTAGTATCGGCCTTAACAGCACAACAAATGCGTTTTGAACCTGATAACAAAAACACTCAA
CGTAAAGACCCCTATTATGGAGCAGACTGGGGAATAGGGTGGTGGACAGCTGTAGTGATA
ATGTTGATAGTAGGTATAATAACACCAGTGTTTTATTTGTTGTATTATGCAATTTTAGCT
AAGGTGGATGTTAGTCATCATTCAACAGTGGACTCTTCACATTTACATTCAAAAATCACA
CCCCCATCACAGCAGAGAGAAATGGAAAATGGAATTGTGCCAACTAAAGGAATACATTTC
AGCCAACAAGATGATCATAAACTGTATAGTCAAGATTCTCAGTCACCTGCTGCTCAACAG
GAAACAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT