OR5H1 ORF clone FXC10884

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Flexi ORF Clone FXC10884

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Clone info.

Species

human

Clone Name

pF1KE0235 Sequence (with vector) Restriction Map

Product ID

FXC10884

HaloTag Clone PID

FHC10884

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528772]

Gene

KIEE0235

Symbol

OR5H1

Alias : HSHTPCRX14, HTPCRX14

Description

olfactory receptor, family 5, subfamily H, member 1

Original Clone ID

oc00935

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33797.1 2.2e-86 100.0 OR5H1 CCDS33799.1 2.1e-82 94.6 OR5H15 CCDS33798.1 7.4e-75 88.0 OR5H14 CCDS33800.1 6.9e-70 81.6 OR5H6 CCDS33801.1 1.7e-69 79.6 OR5H2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 25 IPLFLAFLVIYLITIMGNLGLIA 47 PRIMARY 23 2 55 LHIPMYLLLGNLAFVDAWISSTV 77 SECONDARY 23 3 99 IQFFSFAISVTTECFLLATMAYD 121 SECONDARY 23 4 125 AICKPLLYPAIMTNGLCIRLLIL 147 PRIMARY 23 5 200 FIFSGSIQVFSIVTILVSYTFVL 222 PRIMARY 23 6 245 LFSVSLYYGPLLFIYVGPASPQA 267 SECONDARY 23 7 271 DMVEPLFYTVIIPLLNPIIYSLR 293 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 47.4 99.0 NP_003688 314 608492 42.8 100.0 NP_001004729 311 615702 42.4 96.8 NP_001005487 307 611677 37.3 97.1 XP_011520809 312 603232 39.5 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0235 Download

>KIEE0235  939 bp
ATGGAAGAGGAAAATGCAACATTGCTGACAGAGTTTGTTCTCACAGGATTTTTATATCAA
CCACAGTGGAAAATACCCCTGTTCCTGGCATTCTTGGTAATATATCTCATCACCATCATG
GGGAATCTTGGTCTGATTGCTGTCATCTGGAAAGACCCTCACCTTCATATCCCAATGTAC
TTACTCCTTGGGAATTTAGCTTTTGTGGATGCTTGGATATCATCCACAGTGACCCCAAAG
ATGCTGAATAACTTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCAAGATACAG
TTTTTTTCGTTTGCAATCAGTGTAACCACGGAATGTTTTCTCTTGGCAACGATGGCATAT
GATCGCTATGTAGCCATATGCAAACCTTTACTTTATCCAGCCATTATGACCAATGGACTG
TGCATCCGGCTATTAATCTTGTCATATGTAGGTGGTATTCTTCATGCTTTAATCCATGAA
GGATTTTTATTCAGACTAACCTTCTGTAACTCCAACATAGTACATCACATTTACTGTGAC
ACTATCCCATTGTCTAAGATTTCTTGTACTGATTCTTCTATTAATTTTCTAATGGTTTTT
ATTTTCTCAGGTTCAATTCAGGTATTCAGCATTGTGACTATTCTTGTATCTTATACATTT
GTTCTCTTCGCAATCTTAAAAAAGAAATCTGATAAAGGTGTAAGGAAAGCCTTTTCCACC
TGTGGAGCCCATCTCTTCTCTGTCTCTTTATACTATGGACCCCTTCTCTTCATTTATGTG
GGCCCTGCATCTCCGCAAGCAGATGATCAAGATATGGTGGAGCCTCTATTCTACACTGTC
ATCATTCCTTTGTTAAATCCTATCATCTACAGTCTGAGAAATAAGCAAGTCACAGTTTCA
TTCACAAAAATGTTAAAAAAACATGTTAAGGTTTCATAC

ORF Protein

Cloned ORF protein sequence for pF1KE0235 Download

>KIEE0235  313 aa
MEEENATLLTEFVLTGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMY
LLLGNLAFVDAWISSTVTPKMLNNFLAKSKMISLSECKIQFFSFAISVTTECFLLATMAY
DRYVAICKPLLYPAIMTNGLCIRLLILSYVGGILHALIHEGFLFRLTFCNSNIVHHIYCD
TIPLSKISCTDSSINFLMVFIFSGSIQVFSIVTILVSYTFVLFAILKKKSDKGVRKAFST
CGAHLFSVSLYYGPLLFIYVGPASPQADDQDMVEPLFYTVIIPLLNPIIYSLRNKQVTVS
FTKMLKKHVKVSY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0235 Download

>pF1KE0235  4052 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAAGAGGAA
AATGCAACATTGCTGACAGAGTTTGTTCTCACAGGATTTTTATATCAACCACAGTGGAAA
ATACCCCTGTTCCTGGCATTCTTGGTAATATATCTCATCACCATCATGGGGAATCTTGGT
CTGATTGCTGTCATCTGGAAAGACCCTCACCTTCATATCCCAATGTACTTACTCCTTGGG
AATTTAGCTTTTGTGGATGCTTGGATATCATCCACAGTGACCCCAAAGATGCTGAATAAC
TTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCAAGATACAGTTTTTTTCGTTT
GCAATCAGTGTAACCACGGAATGTTTTCTCTTGGCAACGATGGCATATGATCGCTATGTA
GCCATATGCAAACCTTTACTTTATCCAGCCATTATGACCAATGGACTGTGCATCCGGCTA
TTAATCTTGTCATATGTAGGTGGTATTCTTCATGCTTTAATCCATGAAGGATTTTTATTC
AGACTAACCTTCTGTAACTCCAACATAGTACATCACATTTACTGTGACACTATCCCATTG
TCTAAGATTTCTTGTACTGATTCTTCTATTAATTTTCTAATGGTTTTTATTTTCTCAGGT
TCAATTCAGGTATTCAGCATTGTGACTATTCTTGTATCTTATACATTTGTTCTCTTCGCA
ATCTTAAAAAAGAAATCTGATAAAGGTGTAAGGAAAGCCTTTTCCACCTGTGGAGCCCAT
CTCTTCTCTGTCTCTTTATACTATGGACCCCTTCTCTTCATTTATGTGGGCCCTGCATCT
CCGCAAGCAGATGATCAAGATATGGTGGAGCCTCTATTCTACACTGTCATCATTCCTTTG
TTAAATCCTATCATCTACAGTCTGAGAAATAAGCAAGTCACAGTTTCATTCACAAAAATG
TTAAAAAAACATGTTAAGGTTTCATACGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT