SLCO1B3 ORF clone FXC06891

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Flexi ORF Clone FXC06891

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Clone info.

Species

human

Clone Name

pF1KE0038 Sequence (with vector) Restriction Map

Product ID

FXC06891

HaloTag Clone PID

FHC06891

ORF Sequence

DNA sequence (2106 bp)
Protein sequence (702 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527219]

Gene

KIEE0038

Symbol

SLCO1B3

Alias : HBLRR, LST-2, LST-3TM13, LST3, OATP-8, OATP1B3, OATP8, SLC21A8

Description

solute carrier organic anion transporter family, member 1B3

Original Clone ID

oc00738

Features of the cloned ORF sequence

Description

Length: 2106 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 702 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8684.1 0 100.0 SLCO1B3 CCDS8685.1 0 79.8 SLCO1B1 CCDS44843.1 1.5e-211 78.3 SLCO1B7 CCDS8683.1 6.5e-130 47.0 SLCO1C1 CCDS53757.1 2.6e-125 48.5 SLCO1C1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004156 28 620 PF03137 Organic anion transporter polypeptide OATP IPR011497 465 506 PF07648 Protease inhibitor HMMTigr IPR004156 2 649 TIGR00805 Organic anion transporter polypeptide OATP ProfileScan IPR020846 30 650 PS50850 Major facilitator superfamily domain NULL 453 508 PS51465 NULL
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 29 MFLAALSFSYIAKALGGIIMKIS 51 SECONDARY 23 2 210 GSLNAIGMIGPVIGFALGSLFAK 232 PRIMARY 23 3 256 GAWWLGFLVSGLFSIISSIPFFF 278 PRIMARY 23 4 337 LYVIFLLLTLLQVSSFIGSFTYV 359 PRIMARY 23 5 374 ANFLLGIITIPTVATGMFLGGFI 396 SECONDARY 23 6 406 GIAKFSFLTSMISFLFQLLYFPL 428 PRIMARY 23 7 536 IYVAIQVINSLFSATGGTTFILL 558 SECONDARY 23 8 574 FQSMVIRTLGGILAPIYFGALID 596 SECONDARY 23 9 624 VYLGLSIALRFPALVLYIVFIFA 646 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_062818 702 237450,605495 100.0 100.0 NP_006437 691 237450,604843 79.8 98.4 NP_059131 712 613389 47.0 93.3 XP_005253451 712 613389 47.0 93.3 XP_011519006 711 613389 47.0 93.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0038 Download

>KIEE0038  2106 bp
ATGGACCAACATCAACATTTGAATAAAACAGCAGAGTCAGCATCTTCAGAGAAAAAGAAA
ACAAGACGCTGCAATGGATTCAAGATGTTCTTGGCAGCCCTGTCATTCAGCTATATTGCT
AAAGCACTAGGTGGAATCATTATGAAAATTTCCATCACTCAAATAGAAAGGAGATTTGAC
ATATCCTCTTCTCTTGCTGGTTTAATTGATGGAAGCTTTGAAATTGGAAATTTGCTTGTG
ATTGTATTTGTAAGTTACTTTGGATCTAAACTACACAGACCGAAGTTAATTGGAATTGGT
TGTCTCCTTATGGGAACTGGAAGTATTTTGACATCTTTACCACATTTCTTCATGGGATAT
TATAGGTATTCTAAAGAAACCCATATTAATCCATCAGAAAATTCAACATCAAGTTTATCA
ACCTGTTTAATTAATCAAACCTTATCATTCAATGGAACATCACCTGAGATAGTAGAAAAA
GATTGTGTAAAGGAATCTGGGTCACACATGTGGATCTATGTCTTCATGGGGAATATGCTT
CGTGGCATAGGGGAAACCCCCATAGTACCATTGGGGATTTCATACATTGATGATTTTGCA
AAAGAAGGACATTCTTCCTTGTATTTAGGTAGTTTGAATGCAATAGGAATGATTGGTCCA
GTCATTGGCTTTGCACTGGGATCTCTGTTTGCTAAAATGTACGTGGATATTGGATATGTA
GATCTGAGCACTATCAGAATAACTCCTAAGGACTCTCGTTGGGTTGGAGCTTGGTGGCTT
GGTTTCCTTGTGTCTGGACTATTTTCCATTATTTCTTCCATACCATTTTTTTTCTTGCCG
AAAAATCCAAATAAACCACAAAAAGAAAGAAAAATTTCACTATCATTGCATGTGCTGAAA
ACAAATGATGATAGAAATCAAACAGCTAATTTGACCAACCAAGGAAAAAATGTTACCAAA
AATGTGACTGGTTTTTTCCAGTCTTTGAAAAGCATCCTTACCAATCCCCTGTATGTTATA
TTTCTGCTTTTGACATTGTTACAAGTAAGCAGCTTTATTGGTTCTTTTACTTACGTCTTT
AAATATATGGAGCAACAGTACGGTCAGTCTGCATCTCATGCTAACTTTTTGTTGGGAATC
ATAACCATTCCTACGGTTGCAACTGGAATGTTTTTAGGAGGATTTATCATTAAAAAATTC
AAATTGTCTTTAGTTGGAATTGCCAAATTTTCATTTCTTACTTCGATGATATCCTTCTTG
TTTCAACTTCTATATTTCCCTCTAATCTGCGAAAGCAAATCAGTTGCCGGCCTAACCTTG
ACCTATGATGGAAATAATTCAGTGGCATCTCATGTAGATGTACCACTTTCTTATTGCAAC
TCAGAGTGCAATTGTGATGAAAGTCAGTGGGAACCAGTCTGTGGGAACAATGGAATAACT
TACCTGTCACCTTGTCTAGCAGGATGCAAATCCTCAAGTGGTATTAAAAAGCATACAGTG
TTTTATAACTGTAGTTGTGTGGAAGTAACTGGTCTCCAGAACAGAAATTACTCAGCACAC
TTGGGTGAATGCCCAAGAGATAATACTTGTACAAGGAAATTTTTCATCTATGTTGCAATT
CAAGTCATAAACTCTTTGTTCTCTGCAACAGGAGGTACCACATTTATCTTGTTGACTGTG
AAGATTGTTCAACCTGAATTGAAAGCACTTGCAATGGGTTTCCAGTCAATGGTTATAAGA
ACACTAGGAGGAATTCTAGCTCCAATATATTTTGGGGCTCTGATTGATAAAACATGTATG
AAGTGGTCCACCAACAGCTGTGGAGCACAAGGAGCTTGTAGGATATATAATTCCGTATTT
TTTGGAAGGGTCTACTTGGGCTTATCTATAGCTTTAAGATTCCCAGCACTTGTTTTATAT
ATTGTTTTCATTTTTGCTATGAAGAAAAAATTTCAAGGAAAAGATACCAAGGCATCGGAC
AATGAAAGAAAAGTAATGGATGAAGCAAACTTAGAATTCTTAAATAATGGTGAACATTTT
GTACCTTCTGCTGGAACAGATAGTAAAACATGTAATTTGGACATGCAAGACAATGCTGCT
GCCAAC

ORF Protein

Cloned ORF protein sequence for pF1KE0038 Download

>KIEE0038  702 aa
MDQHQHLNKTAESASSEKKKTRRCNGFKMFLAALSFSYIAKALGGIIMKISITQIERRFD
ISSSLAGLIDGSFEIGNLLVIVFVSYFGSKLHRPKLIGIGCLLMGTGSILTSLPHFFMGY
YRYSKETHINPSENSTSSLSTCLINQTLSFNGTSPEIVEKDCVKESGSHMWIYVFMGNML
RGIGETPIVPLGISYIDDFAKEGHSSLYLGSLNAIGMIGPVIGFALGSLFAKMYVDIGYV
DLSTIRITPKDSRWVGAWWLGFLVSGLFSIISSIPFFFLPKNPNKPQKERKISLSLHVLK
TNDDRNQTANLTNQGKNVTKNVTGFFQSLKSILTNPLYVIFLLLTLLQVSSFIGSFTYVF
KYMEQQYGQSASHANFLLGIITIPTVATGMFLGGFIIKKFKLSLVGIAKFSFLTSMISFL
FQLLYFPLICESKSVAGLTLTYDGNNSVASHVDVPLSYCNSECNCDESQWEPVCGNNGIT
YLSPCLAGCKSSSGIKKHTVFYNCSCVEVTGLQNRNYSAHLGECPRDNTCTRKFFIYVAI
QVINSLFSATGGTTFILLTVKIVQPELKALAMGFQSMVIRTLGGILAPIYFGALIDKTCM
KWSTNSCGAQGACRIYNSVFFGRVYLGLSIALRFPALVLYIVFIFAMKKKFQGKDTKASD
NERKVMDEANLEFLNNGEHFVPSAGTDSKTCNLDMQDNAAAN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0038 Download

>pF1KE0038  5219 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACCAACAT
CAACATTTGAATAAAACAGCAGAGTCAGCATCTTCAGAGAAAAAGAAAACAAGACGCTGC
AATGGATTCAAGATGTTCTTGGCAGCCCTGTCATTCAGCTATATTGCTAAAGCACTAGGT
GGAATCATTATGAAAATTTCCATCACTCAAATAGAAAGGAGATTTGACATATCCTCTTCT
CTTGCTGGTTTAATTGATGGAAGCTTTGAAATTGGAAATTTGCTTGTGATTGTATTTGTA
AGTTACTTTGGATCTAAACTACACAGACCGAAGTTAATTGGAATTGGTTGTCTCCTTATG
GGAACTGGAAGTATTTTGACATCTTTACCACATTTCTTCATGGGATATTATAGGTATTCT
AAAGAAACCCATATTAATCCATCAGAAAATTCAACATCAAGTTTATCAACCTGTTTAATT
AATCAAACCTTATCATTCAATGGAACATCACCTGAGATAGTAGAAAAAGATTGTGTAAAG
GAATCTGGGTCACACATGTGGATCTATGTCTTCATGGGGAATATGCTTCGTGGCATAGGG
GAAACCCCCATAGTACCATTGGGGATTTCATACATTGATGATTTTGCAAAAGAAGGACAT
TCTTCCTTGTATTTAGGTAGTTTGAATGCAATAGGAATGATTGGTCCAGTCATTGGCTTT
GCACTGGGATCTCTGTTTGCTAAAATGTACGTGGATATTGGATATGTAGATCTGAGCACT
ATCAGAATAACTCCTAAGGACTCTCGTTGGGTTGGAGCTTGGTGGCTTGGTTTCCTTGTG
TCTGGACTATTTTCCATTATTTCTTCCATACCATTTTTTTTCTTGCCGAAAAATCCAAAT
AAACCACAAAAAGAAAGAAAAATTTCACTATCATTGCATGTGCTGAAAACAAATGATGAT
AGAAATCAAACAGCTAATTTGACCAACCAAGGAAAAAATGTTACCAAAAATGTGACTGGT
TTTTTCCAGTCTTTGAAAAGCATCCTTACCAATCCCCTGTATGTTATATTTCTGCTTTTG
ACATTGTTACAAGTAAGCAGCTTTATTGGTTCTTTTACTTACGTCTTTAAATATATGGAG
CAACAGTACGGTCAGTCTGCATCTCATGCTAACTTTTTGTTGGGAATCATAACCATTCCT
ACGGTTGCAACTGGAATGTTTTTAGGAGGATTTATCATTAAAAAATTCAAATTGTCTTTA
GTTGGAATTGCCAAATTTTCATTTCTTACTTCGATGATATCCTTCTTGTTTCAACTTCTA
TATTTCCCTCTAATCTGCGAAAGCAAATCAGTTGCCGGCCTAACCTTGACCTATGATGGA
AATAATTCAGTGGCATCTCATGTAGATGTACCACTTTCTTATTGCAACTCAGAGTGCAAT
TGTGATGAAAGTCAGTGGGAACCAGTCTGTGGGAACAATGGAATAACTTACCTGTCACCT
TGTCTAGCAGGATGCAAATCCTCAAGTGGTATTAAAAAGCATACAGTGTTTTATAACTGT
AGTTGTGTGGAAGTAACTGGTCTCCAGAACAGAAATTACTCAGCACACTTGGGTGAATGC
CCAAGAGATAATACTTGTACAAGGAAATTTTTCATCTATGTTGCAATTCAAGTCATAAAC
TCTTTGTTCTCTGCAACAGGAGGTACCACATTTATCTTGTTGACTGTGAAGATTGTTCAA
CCTGAATTGAAAGCACTTGCAATGGGTTTCCAGTCAATGGTTATAAGAACACTAGGAGGA
ATTCTAGCTCCAATATATTTTGGGGCTCTGATTGATAAAACATGTATGAAGTGGTCCACC
AACAGCTGTGGAGCACAAGGAGCTTGTAGGATATATAATTCCGTATTTTTTGGAAGGGTC
TACTTGGGCTTATCTATAGCTTTAAGATTCCCAGCACTTGTTTTATATATTGTTTTCATT
TTTGCTATGAAGAAAAAATTTCAAGGAAAAGATACCAAGGCATCGGACAATGAAAGAAAA
GTAATGGATGAAGCAAACTTAGAATTCTTAAATAATGGTGAACATTTTGTACCTTCTGCT
GGAACAGATAGTAAAACATGTAATTTGGACATGCAAGACAATGCTGCTGCCAACGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT