NKX3-2 ORF clone FXC06157

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Flexi ORF Clone FXC06157

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Clone info.

Species

human

Clone Name

pF1KB8956 Sequence (with vector) Restriction Map

Product ID

FXC06157

HaloTag Clone PID

FHC06157

ORF Sequence

DNA sequence (999 bp)
Protein sequence (333 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463932]

Gene

KIBB8956

Symbol

NKX3-2

Alias : BAPX1, NKX3.2, NKX3B, SMMD

Description

NK3 homeobox 2

Original Clone ID

cp00991

Features of the cloned ORF sequence

Description

Length: 999 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 333 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3410.1 2.3e-93 100.0 2 CCDS41558.1 1.2e-11 49.0 3 CCDS59095.1 3.9e-11 53.2 1 CCDS6042.1 5.1e-11 39.6 1 CCDS41575.1 6.3e-11 33.0 HMX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 228 239 PR00024 Homeobox IPR020479 243 253 PR00024 Homeobox IPR020479 253 262 PR00024 Homeobox HMMPfam IPR001356 207 263 PF00046 Homeobox HMMSmart IPR001356 206 268 SM00389 Homeobox ProfileScan IPR001356 204 264 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001180 333 602183,613330 100.0 100.0 NP_001099044 357 613380 33.0 93.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8956 Download

>KIBB8956  999 bp
ATGGCTGTGCGCGGCGCCAACACCTTGACGTCCTTCTCCATCCAGGCGATCCTCAACAAG
AAAGAGGAGCGCGGCGGGCTGGCCGCGCCAGAGGGGCGCCCGGCGCCCGGGGGCACAGCG
GCATCGGTGGCCGCGGCTCCCGCTGTCTGCTGTTGGCGGCTCTTTGGGGAGAGGGACGCG
GGCGCGTTGGGGGGCGCCGAGGACTCTCTGCTGGCGTCTCCTGCCGGTACCAGAACAGCT
GCGGGGAGGACTGCGGAGAGCCCGGAAGGCTGGGACTCGGACTCCGCGCTCAGCGAGGAG
AACGAGAGCAGGCGGCGCTGCGCGGACGCGCGGGGGGCCAGCGGGGCCGGCCTTGCGGGG
GGATCCTTGAGCCTCGGCCAGCCGGTCTGTGAGCTGGCCGCTTCCAAAGACCTAGAGGAG
GAAGCCGCGGGCCGGAGCGACAGCGAGATGTCCGCCAGCGTCTCAGGCGACCGCAGCCCA
AGGACCGAGGACGACGGTGTTGGCCCCAGAGGTGCACACGTGTCCGCGCTGTGCAGCGGG
GCCGGCGGCGGGGGCGGCAGCGGGCCGGCAGGCGTCGCGGAGGAGGAGGAGGAGCCGGCG
GCGCCCAAGCCACGCAAGAAGCGCTCGCGGGCCGCTTTCTCCCACGCGCAGGTCTTCGAG
CTGGAGCGCCGCTTTAACCACCAGCGCTACCTGTCCGGGCCCGAGCGCGCAGACCTGGCC
GCGTCGCTGAAGCTCACCGAGACGCAGGTGAAAATCTGGTTCCAGAACCGTCGCTACAAG
ACAAAGCGCCGGCAGATGGCAGCCGACCTGCTGGCCTCGGCGCCCGCCGCCAAGAAGGTG
GCCGTAAAGGTGCTGGTGCGCGACGACCAGAGACAATACCTGCCCGGCGAAGTGCTGCGG
CCACCCTCGCTTCTGCCACTGCAGCCCTCCTACTATTACCCGTACTACTGCCTCCCAGGC
TGGGCGCTCTCCACCTGCGCAGCTGCCGCAGGCACCCAG

ORF Protein

Cloned ORF protein sequence for pF1KB8956 Download

>KIBB8956  333 aa
MAVRGANTLTSFSIQAILNKKEERGGLAAPEGRPAPGGTAASVAAAPAVCCWRLFGERDA
GALGGAEDSLLASPAGTRTAAGRTAESPEGWDSDSALSEENESRRRCADARGASGAGLAG
GSLSLGQPVCELAASKDLEEEAAGRSDSEMSASVSGDRSPRTEDDGVGPRGAHVSALCSG
AGGGGGSGPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLA
ASLKLTETQVKIWFQNRRYKTKRRQMAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLR
PPSLLPLQPSYYYPYYCLPGWALSTCAAAAGTQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8956 Download

>pF1KB8956  4112 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTGTGCGC
GGCGCCAACACCTTGACGTCCTTCTCCATCCAGGCGATCCTCAACAAGAAAGAGGAGCGC
GGCGGGCTGGCCGCGCCAGAGGGGCGCCCGGCGCCCGGGGGCACAGCGGCATCGGTGGCC
GCGGCTCCCGCTGTCTGCTGTTGGCGGCTCTTTGGGGAGAGGGACGCGGGCGCGTTGGGG
GGCGCCGAGGACTCTCTGCTGGCGTCTCCTGCCGGTACCAGAACAGCTGCGGGGAGGACT
GCGGAGAGCCCGGAAGGCTGGGACTCGGACTCCGCGCTCAGCGAGGAGAACGAGAGCAGG
CGGCGCTGCGCGGACGCGCGGGGGGCCAGCGGGGCCGGCCTTGCGGGGGGATCCTTGAGC
CTCGGCCAGCCGGTCTGTGAGCTGGCCGCTTCCAAAGACCTAGAGGAGGAAGCCGCGGGC
CGGAGCGACAGCGAGATGTCCGCCAGCGTCTCAGGCGACCGCAGCCCAAGGACCGAGGAC
GACGGTGTTGGCCCCAGAGGTGCACACGTGTCCGCGCTGTGCAGCGGGGCCGGCGGCGGG
GGCGGCAGCGGGCCGGCAGGCGTCGCGGAGGAGGAGGAGGAGCCGGCGGCGCCCAAGCCA
CGCAAGAAGCGCTCGCGGGCCGCTTTCTCCCACGCGCAGGTCTTCGAGCTGGAGCGCCGC
TTTAACCACCAGCGCTACCTGTCCGGGCCCGAGCGCGCAGACCTGGCCGCGTCGCTGAAG
CTCACCGAGACGCAGGTGAAAATCTGGTTCCAGAACCGTCGCTACAAGACAAAGCGCCGG
CAGATGGCAGCCGACCTGCTGGCCTCGGCGCCCGCCGCCAAGAAGGTGGCCGTAAAGGTG
CTGGTGCGCGACGACCAGAGACAATACCTGCCCGGCGAAGTGCTGCGGCCACCCTCGCTT
CTGCCACTGCAGCCCTCCTACTATTACCCGTACTACTGCCTCCCAGGCTGGGCGCTCTCC
ACCTGCGCAGCTGCCGCAGGCACCCAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT