IRX6 ORF clone FXC05538

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Flexi ORF Clone FXC05538

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Clone info.

Species

human

Clone Name

pF1KB9729 Sequence (with vector) Restriction Map

Product ID

FXC05538

HaloTag Clone PID

FHC05538

ORF Sequence

DNA sequence (1338 bp)
Protein sequence (446 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463805]

Gene

KIBB9729

Symbol

IRX6

Alias : IRX-3, IRX7, IRXB3

Description

iroquois homeobox 6

Original Clone ID

cp00312

Features of the cloned ORF sequence

Description

Length: 1338 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 446 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32449.1 1.4e-114 100.0 IRX6 CCDS3867.1 3.7e-29 44.1 IRX4 CCDS10750.1 2.8e-19 40.9 IRX3 CCDS3868.1 2.3e-16 36.6 IRX2 CCDS75225.1 5.6e-15 41.8 IRX4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 150 206 PF00046 Homeobox HMMSmart IPR001356 146 211 SM00389 Homeobox IPR003893 344 361 SM00548 Iroquois-class homeodomain protein ProfileScan IPR001356 144 207 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_077311 446 606196 100.0 100.0 XP_005256194 445 606196 100.0 99.6 NP_001265561 519 606199 44.1 91.3 NP_057442 519 606199 44.1 91.3 NP_001265563 519 606199 44.1 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9729 Download

>KIBB9729  1338 bp
ATGTCCTTCCCACACTTTGGACACCCGTACCGCGGCGCTTCCCAGTTTCTGGCGTCGGCA
AGTTCCAGCACCACATGCTGCGAATCTACCCAACGCTCTGTCTCAGATGTGGCATCAGGC
TCCACCCCAGCGCCCGCTCTCTGCTGCGCACCCTACGATAGTCGACTGCTGGGCAGTGCG
CGACCGGAGCTGGGCGCCGCCTTGGGCATCTATGGAGCACCCTATGCGGCCGCTGCAGCT
GCCCAGAGCTACCCTGGCTACCTGCCCTATAGCCCAGAGCCCCCCTCACTGTATGGGGCA
CTGAATCCACAGTATGAATTTAAGGAGGCTGCAGGGAGTTTTACATCCAGCCTGGCACAA
CCAGGAGCCTATTATCCCTATGAGCGGACTCTGGGGCAGTACCAATATGAACGGTATGGC
GCAGTGGAATTGAGTGGCGCCGGTCGCCGAAAGAACGCGACCCGGGAGACCACCAGTACA
CTCAAGGCCTGGCTCAACGAGCACCGCAAAAACCCCTACCCCACTAAGGGTGAGAAGATC
ATGCTGGCCATCATCACCAAGATGACCCTCACCCAGGTGTCCACCTGGTTCGCCAACGCA
CGCCGGCGCCTCAAGAAAGAGAACAAAATGACATGGGCGCCCAAGAACAAAGGTGGGGAG
GAGAGGAAGGCAGAGGGAGGAGAGGAGGACTCACTAGGCTGCCTAACTGCTGACACCAAA
GAAGTTACTGCTAGCCAGGAGGCCCGGGGGCTCCGGCTGAGTGACCTGGAAGACCTGGAG
GAAGAGGAGGAGGAGGAGGAGGAAGCTGAAGACGAGGAGGTAGTGGCCACAGCTGGGGAC
AGGCTGACGGAGTTCCGAAAGGGCGCGCAGTCACTGCCTGGGCCGTGCGCTGCAGCTCGA
GAGGGCCGATTGGAGCGCAGGGAGTGCGGCCTGGCTGCGCCCCGCTTCTCCTTCAATGAC
CCTTCCGGATCGGAAGAAGCTGACTTCCTCTCGGCGGAGACAGGCAGCCCTAGGTTGACC
ATGCACTACCCATGCTTGGAGAAACCGCGCATCTGGTCTCTGGCGCACACCGCGACAGCC
AGCGCTGTTGAAGGTGCACCCCCAGCCCGGCCTAGGCCACGAAGTCCTGAGTGCCGTATG
ATTCCTGGACAGCCTCCTGCCTCTGCCCGGCGACTCTCAGTCCCCAGAGACTCCGCGTGC
GACGAGTCTTCCTGCATACCCAAAGCCTTTGGAAACCCCAAGTTTGCCCTGCAGGGACTA
CCGCTGAACTGTGCGCCGTGCCCGCGGAGGAGCGAGCCTGTAGTGCAGTGCCAGTACCCG
TCTGGAGCAGAAGCAGGT

ORF Protein

Cloned ORF protein sequence for pF1KB9729 Download

>KIBB9729  446 aa
MSFPHFGHPYRGASQFLASASSSTTCCESTQRSVSDVASGSTPAPALCCAPYDSRLLGSA
RPELGAALGIYGAPYAAAAAAQSYPGYLPYSPEPPSLYGALNPQYEFKEAAGSFTSSLAQ
PGAYYPYERTLGQYQYERYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLTADTK
EVTASQEARGLRLSDLEDLEEEEEEEEEAEDEEVVATAGDRLTEFRKGAQSLPGPCAAAR
EGRLERRECGLAAPRFSFNDPSGSEEADFLSAETGSPRLTMHYPCLEKPRIWSLAHTATA
SAVEGAPPARPRPRSPECRMIPGQPPASARRLSVPRDSACDESSCIPKAFGNPKFALQGL
PLNCAPCPRRSEPVVQCQYPSGAEAG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9729 Download

>pF1KB9729  4451 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCTTCCCA
CACTTTGGACACCCGTACCGCGGCGCTTCCCAGTTTCTGGCGTCGGCAAGTTCCAGCACC
ACATGCTGCGAATCTACCCAACGCTCTGTCTCAGATGTGGCATCAGGCTCCACCCCAGCG
CCCGCTCTCTGCTGCGCACCCTACGATAGTCGACTGCTGGGCAGTGCGCGACCGGAGCTG
GGCGCCGCCTTGGGCATCTATGGAGCACCCTATGCGGCCGCTGCAGCTGCCCAGAGCTAC
CCTGGCTACCTGCCCTATAGCCCAGAGCCCCCCTCACTGTATGGGGCACTGAATCCACAG
TATGAATTTAAGGAGGCTGCAGGGAGTTTTACATCCAGCCTGGCACAACCAGGAGCCTAT
TATCCCTATGAGCGGACTCTGGGGCAGTACCAATATGAACGGTATGGCGCAGTGGAATTG
AGTGGCGCCGGTCGCCGAAAGAACGCGACCCGGGAGACCACCAGTACACTCAAGGCCTGG
CTCAACGAGCACCGCAAAAACCCCTACCCCACTAAGGGTGAGAAGATCATGCTGGCCATC
ATCACCAAGATGACCCTCACCCAGGTGTCCACCTGGTTCGCCAACGCACGCCGGCGCCTC
AAGAAAGAGAACAAAATGACATGGGCGCCCAAGAACAAAGGTGGGGAGGAGAGGAAGGCA
GAGGGAGGAGAGGAGGACTCACTAGGCTGCCTAACTGCTGACACCAAAGAAGTTACTGCT
AGCCAGGAGGCCCGGGGGCTCCGGCTGAGTGACCTGGAAGACCTGGAGGAAGAGGAGGAG
GAGGAGGAGGAAGCTGAAGACGAGGAGGTAGTGGCCACAGCTGGGGACAGGCTGACGGAG
TTCCGAAAGGGCGCGCAGTCACTGCCTGGGCCGTGCGCTGCAGCTCGAGAGGGCCGATTG
GAGCGCAGGGAGTGCGGCCTGGCTGCGCCCCGCTTCTCCTTCAATGACCCTTCCGGATCG
GAAGAAGCTGACTTCCTCTCGGCGGAGACAGGCAGCCCTAGGTTGACCATGCACTACCCA
TGCTTGGAGAAACCGCGCATCTGGTCTCTGGCGCACACCGCGACAGCCAGCGCTGTTGAA
GGTGCACCCCCAGCCCGGCCTAGGCCACGAAGTCCTGAGTGCCGTATGATTCCTGGACAG
CCTCCTGCCTCTGCCCGGCGACTCTCAGTCCCCAGAGACTCCGCGTGCGACGAGTCTTCC
TGCATACCCAAAGCCTTTGGAAACCCCAAGTTTGCCCTGCAGGGACTACCGCTGAACTGT
GCGCCGTGCCCGCGGAGGAGCGAGCCTGTAGTGCAGTGCCAGTACCCGTCTGGAGCAGAA
GCAGGTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT