SMYD5 ORF clone FXC03852

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Flexi ORF Clone FXC03852

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Clone info.

Species

human

Clone Name

pF1KB0956 Sequence (with vector) Restriction Map

Product ID

FXC03852

HaloTag Clone PID

FHC03852

ORF Sequence

DNA sequence (1254 bp)
Protein sequence (418 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527925]

Gene

KIBB0956

Symbol

SMYD5

Alias : NN8-4AG, RAI15, RRG1, ZMYND23

Description

SMYD family member 5

Original Clone ID

cs02056

Features of the cloned ORF sequence

Description

Length: 1254 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 418 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33221.2 5.1e-146 100.0 SMYD5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001214 33 351 PF00856 SET domain HMMSmart IPR001214 21 358 SM00317 SET domain ProfileScan IPR001214 315 351 PS50280 SET domain Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0956 Download

>KIBB0956  1254 bp
ATGGCGGCCTCCATGTGCGACGTGTTCTCCTTCTGCGTGGGCGTGGCGGGCCGCGCGCGG
GTCTCCGTGGAAGTCCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGTTTGCCACACAG
CTCATCCGGAAGGGGGAGACCATCTTCGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTC
TGGAATGCACTTTATCGCTACCGAGCCTGTGACCACTGCCTTAGGGCACTAGAGAAGGCA
GAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTG
TGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGT
GCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCTCC
CAGGATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTAC
CCACCTGAGACTGCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTGAAGCAGGCG
AAGGACAAGGACCGTTGGATCAGACTCTTTTCCCAGTTTTGTAACAAAACAGCCAATGAA
GAGGAGGAAATTGTCCATAAACTTCTGGGAGACAAATTCAAGGGCCAACTGGAACTTCTG
CGGAGACTCTTCACAGAGGCCCTCTATGAGGAAGCAGTCAGCCAGTGGTTCACTCCAGAT
GGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGCTCC
CTAAGCCAGTGGGTCCATGCCTGTGACACTCTGGAGTTGAAGCCTCAGGACCGTGAGCAG
CTTGACGCCTTCATTGACCAGCTATACAAGGACATCGAGGCAGCAACTGGAGAGTTTCTT
AACTGTGAAGGATCTGGCCTCTTTGTGCTTCAGAGCTGCTGCAACCACAGTTGTGTGCCC
AATGCAGAGACCTCCTTTCCAGAAAACAACTTCCTTTTGCATGTCACTGCTCTGGAGGAT
ATTAAGCCAGGAGAGGAAATTTGTATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGC
CGCCACAGCCGCCACAAGATCCTCAGGGAGAACTATCTATTTGTCTGTTCCTGTCCCAAA
TGCCTGGCAGAGGCTGATGAACCCAATGTGACCTCAGAAGAGGAAGAGGAAGAGGAGGAG
GAGGAGGAAGGAGAGCCAGAAGATGCAGAGCTGGGGGATGAGATGACTGATGTG

ORF Protein

Cloned ORF protein sequence for pF1KB0956 Download

>KIBB0956  418 aa
MAASMCDVFSFCVGVAGRARVSVEVRFVSSAKGKGLFATQLIRKGETIFVERPLVAAQFL
WNALYRYRACDHCLRALEKAEENAQRLTGKPGQVLPHPELCTVRKDLHQNCPHCQVMYCS
AECRLAATEQYHQVLCPGPSQDDPLHPLNKLQEAWRSIHYPPETASIMLMARMVATVKQA
KDKDRWIRLFSQFCNKTANEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEAVSQWFTPD
GFRSLFALVGTNGQGIGTSSLSQWVHACDTLELKPQDREQLDAFIDQLYKDIEAATGEFL
NCEGSGLFVLQSCCNHSCVPNAETSFPENNFLLHVTALEDIKPGEEICISYLDCCQRERS
RHSRHKILRENYLFVCSCPKCLAEADEPNVTSEEEEEEEEEEEGEPEDAELGDEMTDV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0956 Download

>pF1KB0956  4367 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCCTCC
ATGTGCGACGTGTTCTCCTTCTGCGTGGGCGTGGCGGGCCGCGCGCGGGTCTCCGTGGAA
GTCCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGTTTGCCACACAGCTCATCCGGAAG
GGGGAGACCATCTTCGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTT
TATCGCTACCGAGCCTGTGACCACTGCCTTAGGGCACTAGAGAAGGCAGAGGAGAATGCC
CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGC
AAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGG
TTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGATGACCCC
TTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACT
GCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTGAAGCAGGCGAAGGACAAGGAC
CGTTGGATCAGACTCTTTTCCCAGTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATT
GTCCATAAACTTCTGGGAGACAAATTCAAGGGCCAACTGGAACTTCTGCGGAGACTCTTC
ACAGAGGCCCTCTATGAGGAAGCAGTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCT
CTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGCTCCCTAAGCCAGTGG
GTCCATGCCTGTGACACTCTGGAGTTGAAGCCTCAGGACCGTGAGCAGCTTGACGCCTTC
ATTGACCAGCTATACAAGGACATCGAGGCAGCAACTGGAGAGTTTCTTAACTGTGAAGGA
TCTGGCCTCTTTGTGCTTCAGAGCTGCTGCAACCACAGTTGTGTGCCCAATGCAGAGACC
TCCTTTCCAGAAAACAACTTCCTTTTGCATGTCACTGCTCTGGAGGATATTAAGCCAGGA
GAGGAAATTTGTATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGCCGCCACAGCCGC
CACAAGATCCTCAGGGAGAACTATCTATTTGTCTGTTCCTGTCCCAAATGCCTGGCAGAG
GCTGATGAACCCAATGTGACCTCAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGGA
GAGCCAGAAGATGCAGAGCTGGGGGATGAGATGACTGATGTGGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT