RFX3 ORF clone FXC03650

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Flexi ORF Clone FXC03650

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Clone info.

Species

human

Clone Name

pF1KB6235 Sequence (with vector) Restriction Map

Product ID

FXC03650

HaloTag Clone PID

FHC03650

ORF Sequence

DNA sequence (2247 bp)
Protein sequence (749 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527723]

Gene

KIBB6235

Symbol

RFX3

Description

regulatory factor X, 3 (influences HLA class II expression), transcript variant 2

Original Clone ID

cs00835

Features of the cloned ORF sequence

Description

Length: 2247 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 749 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6449.1 0 100.0 RFX3 CCDS6450.1 0 100.0 RFX3 CCDS12157.1 1e-173 66.9 RFX2 CCDS75809.1 1.2e-149 99.3 RFX3 CCDS12158.1 5.7e-146 64.5 RFX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007668 1 139 PF04589 RFX1 transcription activation region IPR003150 182 248 PF02257 DNA-binding RFX
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_602304 749 601337 100.0 100.0 NP_001269045 749 601337 100.0 100.0 NP_002910 707 601337 100.0 87.6 XP_011516300 770 601337 97.3 100.0 XP_006716908 770 601337 97.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6235 Download

>KIBB6235  2247 bp
ATGCAGACATCAGAGACTGGGTCGGACACAGGCTCGACAGTGACCTTACAAACATCTGTG
GCTAGTCAAGCAGCAGTGCCTACGCAGGTGGTACAGCAAGTACCAGTACAACAACAGGTA
CAGCAGGTACAGACTGTGCAGCAGGTACAACATGTCTATCCCGCTCAGGTGCAGTATGTG
GAAGGAAGCGATACTGTCTATACCAATGGAGCAATCCGAACAACAACGTATCCTTACACA
GAGACACAGATGTACAGCCAAAATACTGGAGGGAATTACTTTGATACTCAAGGGAGTTCC
GCCCAGGTGACTACCGTGGTCTCATCCCACAGTATGGTGGGCACTGGTGGGATTCAGATG
GGCGTCACAGGAGGACAACTCATCAGCAGCTCTGGAGGAACCTATCTGATCGGCAACTCA
ATGGAGAATTCTGGTCACTCAGTGACACACACAACTCGGGCCTCCCCAGCGACAATTGAA
ATGGCGATTGAGACGCTGCAAAAGTCTGACGGTCTGTCCACTCACAGAAGCTCTCTTCTC
AACAGCCATCTCCAGTGGCTGTTGGACAATTATGAGACAGCAGAAGGAGTGAGCCTTCCC
AGAAGCACTCTGTACAACCACTACCTTCGACACTGTCAGGAACACAAACTGGACCCAGTC
AATGCTGCCTCTTTTGGAAAATTAATAAGATCAATTTTTATGGGGCTACGAACCAGGAGA
TTGGGCACTAGAGGAAACTCCAAATACCACTACTATGGGATTCGTGTCAAGCCAGATTCC
CCTCTTAATCGTCTGCAAGAAGACATGCAGTATATGGCTATGAGACAACAACCCATGCAA
CAGAAACAAAGGTACAAGCCTATGCAGAAAGTGGATGGGGTTGCAGATGGTTTCACAGGA
AGTGGTCAACAGACAGGCACATCTGTTGAGCAAACTGTAATTGCCCAAAGCCAACATCAT
CAACAGTTTTTAGATGCATCTCGAGCACTTCCAGAGTTTGGAGAAGTTGAAATCTCTTCT
CTGCCAGATGGTACTACCTTTGAGGATATCAAGTCACTGCAGAGTCTTTATAGAGAGCAC
TGTGAGGCAATATTGGACGTTGTTGTGAATCTTCAATTTAGCCTGATAGAAAAATTGTGG
CAAACATTCTGGCGCTATTCTCCCTCTACTCCAACTGATGGCACTACCATTACCGAATCG
AGCAATCTGAGTGAAATAGAAAGTCGACTTCCGAAAGCAAAGCTGATAACTCTGTGCAAA
CATGAGTCTATCCTGAAATGGATGTGTAACTGTGACCATGGGATGTACCAGGCTTTGGTG
GAGATTCTCATCCCCGACGTCCTTAGACCTATTCCTAGTGCCTTGACCCAAGCCATTCGA
AATTTTGCAAAAAGCCTTGAAGGTTGGCTTTCCAATGCCATGAACAATATTCCACAGAGA
ATGATACAAACCAAGGTTGCCGCTGTAAGTGCCTTTGCCCAGACTCTGCGAAGATACACG
TCGCTTAATCACCTGGCCCAGGCAGCTCGTGCAGTGCTTCAGAACACTTCCCAAATCAAC
CAGATGCTTAGTGACCTCAACCGTGTCGACTTTGCCAATGTCCAGGAGCAGGCTTCCTGG
GTGTGCCAGTGTGATGACAACATGGTTCAGAGACTAGAAACAGACTTCAAGATGACTCTT
CAGCAGCAGAGCACCCTGGAGCAGTGGGCTGCGTGGCTTGACAATGTGATGATGCAAGCA
CTGAAACCCTATGAAGGAAGACCCAGTTTTCCTAAAGCCGCCAGGCAGTTTCTGCTAAAA
TGGTCTTTCTACAGCTCAATGGTTATTCGGGACTTAACCTTACGCAGTGCTGCTAGCTTT
GGCTCCTTCCACCTGATCCGTCTACTCTACGACGAATATATGTTTTACTTAGTAGAACAT
CGTGTTGCTCAGGCAACAGGAGAGACTCCTATAGCAGTCATGGGCGAGTTTGGTGATTTA
AATGCCGTGTCTCCTGGAAATCTGGATAAAGATGAAGGCAGTGAAGTAGAAAGTGAAATG
GATGAAGAACTGGATGACTCTTCAGAGCCTCAAGCCAAAAGAGAGAAAACAGAGCTGAGC
CAGGCATTTCCAGTGGGCTGCATGCAGCCTGTTCTCGAGACTGGCGTGCAACCAAGCCTC
CTGAATCCAATTCACAGCGAGCACATTGTCACAAGTACTCAGACTATCAGACAGTGCAGC
GCTACAGGAAATACCTACACTGCAGTC

ORF Protein

Cloned ORF protein sequence for pF1KB6235 Download

>KIBB6235  749 aa
MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK
HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDL
NAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSL
LNPIHSEHIVTSTQTIRQCSATGNTYTAV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6235 Download

>pF1KB6235  5360 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCAGACATCA
GAGACTGGGTCGGACACAGGCTCGACAGTGACCTTACAAACATCTGTGGCTAGTCAAGCA
GCAGTGCCTACGCAGGTGGTACAGCAAGTACCAGTACAACAACAGGTACAGCAGGTACAG
ACTGTGCAGCAGGTACAACATGTCTATCCCGCTCAGGTGCAGTATGTGGAAGGAAGCGAT
ACTGTCTATACCAATGGAGCAATCCGAACAACAACGTATCCTTACACAGAGACACAGATG
TACAGCCAAAATACTGGAGGGAATTACTTTGATACTCAAGGGAGTTCCGCCCAGGTGACT
ACCGTGGTCTCATCCCACAGTATGGTGGGCACTGGTGGGATTCAGATGGGCGTCACAGGA
GGACAACTCATCAGCAGCTCTGGAGGAACCTATCTGATCGGCAACTCAATGGAGAATTCT
GGTCACTCAGTGACACACACAACTCGGGCCTCCCCAGCGACAATTGAAATGGCGATTGAG
ACGCTGCAAAAGTCTGACGGTCTGTCCACTCACAGAAGCTCTCTTCTCAACAGCCATCTC
CAGTGGCTGTTGGACAATTATGAGACAGCAGAAGGAGTGAGCCTTCCCAGAAGCACTCTG
TACAACCACTACCTTCGACACTGTCAGGAACACAAACTGGACCCAGTCAATGCTGCCTCT
TTTGGAAAATTAATAAGATCAATTTTTATGGGGCTACGAACCAGGAGATTGGGCACTAGA
GGAAACTCCAAATACCACTACTATGGGATTCGTGTCAAGCCAGATTCCCCTCTTAATCGT
CTGCAAGAAGACATGCAGTATATGGCTATGAGACAACAACCCATGCAACAGAAACAAAGG
TACAAGCCTATGCAGAAAGTGGATGGGGTTGCAGATGGTTTCACAGGAAGTGGTCAACAG
ACAGGCACATCTGTTGAGCAAACTGTAATTGCCCAAAGCCAACATCATCAACAGTTTTTA
GATGCATCTCGAGCACTTCCAGAGTTTGGAGAAGTTGAAATCTCTTCTCTGCCAGATGGT
ACTACCTTTGAGGATATCAAGTCACTGCAGAGTCTTTATAGAGAGCACTGTGAGGCAATA
TTGGACGTTGTTGTGAATCTTCAATTTAGCCTGATAGAAAAATTGTGGCAAACATTCTGG
CGCTATTCTCCCTCTACTCCAACTGATGGCACTACCATTACCGAATCGAGCAATCTGAGT
GAAATAGAAAGTCGACTTCCGAAAGCAAAGCTGATAACTCTGTGCAAACATGAGTCTATC
CTGAAATGGATGTGTAACTGTGACCATGGGATGTACCAGGCTTTGGTGGAGATTCTCATC
CCCGACGTCCTTAGACCTATTCCTAGTGCCTTGACCCAAGCCATTCGAAATTTTGCAAAA
AGCCTTGAAGGTTGGCTTTCCAATGCCATGAACAATATTCCACAGAGAATGATACAAACC
AAGGTTGCCGCTGTAAGTGCCTTTGCCCAGACTCTGCGAAGATACACGTCGCTTAATCAC
CTGGCCCAGGCAGCTCGTGCAGTGCTTCAGAACACTTCCCAAATCAACCAGATGCTTAGT
GACCTCAACCGTGTCGACTTTGCCAATGTCCAGGAGCAGGCTTCCTGGGTGTGCCAGTGT
GATGACAACATGGTTCAGAGACTAGAAACAGACTTCAAGATGACTCTTCAGCAGCAGAGC
ACCCTGGAGCAGTGGGCTGCGTGGCTTGACAATGTGATGATGCAAGCACTGAAACCCTAT
GAAGGAAGACCCAGTTTTCCTAAAGCCGCCAGGCAGTTTCTGCTAAAATGGTCTTTCTAC
AGCTCAATGGTTATTCGGGACTTAACCTTACGCAGTGCTGCTAGCTTTGGCTCCTTCCAC
CTGATCCGTCTACTCTACGACGAATATATGTTTTACTTAGTAGAACATCGTGTTGCTCAG
GCAACAGGAGAGACTCCTATAGCAGTCATGGGCGAGTTTGGTGATTTAAATGCCGTGTCT
CCTGGAAATCTGGATAAAGATGAAGGCAGTGAAGTAGAAAGTGAAATGGATGAAGAACTG
GATGACTCTTCAGAGCCTCAAGCCAAAAGAGAGAAAACAGAGCTGAGCCAGGCATTTCCA
GTGGGCTGCATGCAGCCTGTTCTCGAGACTGGCGTGCAACCAAGCCTCCTGAATCCAATT
CACAGCGAGCACATTGTCACAAGTACTCAGACTATCAGACAGTGCAGCGCTACAGGAAAT
ACCTACACTGCAGTCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT