-
SpecieshumanProduct IDFXC03041Cloning SiteSgfI-PmeIGeneKIBB8817SymbolNPY2R
Alias : NPY2-RDescriptionneuropeptide Y receptor Y2Original Clone IDcp00852
Length: 1143 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 381 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS3791.1 7e-128 100.0 NPY2R CCDS7606.1 7.2e-32 35.6 PRLHR CCDS8297.1 9.6e-28 35.6 GPR83 CCDS1958.1 4.9e-26 30.4 TACR1 CCDS81459.1 9.9e-26 32.3 1
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001358 2 19 PR01014 Neuropeptide Y2 receptor IPR001358 26 42 PR01014 Neuropeptide Y2 receptor IPR001358 42 59 PR01014 Neuropeptide Y2 receptor IPR000276 52 76 PR00237 GPCR IPR000611 77 89 PR01012 Neuropeptide Y receptor IPR000276 85 106 PR00237 GPCR IPR000611 107 119 PR01012 Neuropeptide Y receptor IPR000276 130 152 PR00237 GPCR IPR000611 130 145 PR01012 Neuropeptide Y receptor IPR000276 164 185 PR00237 GPCR IPR001358 179 192 PR01014 Neuropeptide Y2 receptor IPR001358 193 208 PR01014 Neuropeptide Y2 receptor IPR000276 220 243 PR00237 GPCR IPR001358 233 249 PR01014 Neuropeptide Y2 receptor IPR001358 250 266 PR01014 Neuropeptide Y2 receptor IPR000276 266 290 PR00237 GPCR IPR001358 287 305 PR01014 Neuropeptide Y2 receptor IPR000276 307 333 PR00237 GPCR IPR000611 312 321 PR01012 Neuropeptide Y receptor IPR000611 323 336 PR01012 Neuropeptide Y receptor IPR001358 335 351 PR01014 Neuropeptide Y2 receptor IPR001358 352 365 PR01014 Neuropeptide Y2 receptor IPR001358 365 380 PR01014 Neuropeptide Y2 receptor HMMPfam IPR000276 67 325 PF00001 GPCR ProfileScan IPR017452 67 325 PS50262 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 49 VQVVLILAYCSIILLGVIGNSLV 71 PRIMARY 23 2 87 FFIANLAVADLLVNTLCLPFTLT 109 SECONDARY 23 3 125 LVPYAQGLAVQVSTITLTVIAL 146 SECONDARY 22 4 164 ISFLIIGLAWGISALLASPLAIF 186 PRIMARY 23 5 217 TVYSLSSLLILYVLPLGIISFSY 239 PRIMARY 23 6 269 MLVCVVVVFAVSWLPLHAFQLAV 291 PRIMARY 23 7 299 DLKEYKLIFTVFHIIAMCSTFAN 321 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005263090 381 162642 100.0 100.0 XP_005263091 381 162642 100.0 100.0 NP_000901 381 162642 100.0 100.0 NP_004239 370 600895 35.9 84.8 NP_001049 407 162323 30.4 88.2 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB8817 Download>KIBB8817 1143 bp ATGGGTCCAATAGGTGCAGAGGCTGATGAGAACCAGACAGTGGAAGAAATGAAGGTGGAA CAATACGGGCCACAAACAACTCCTAGAGGTGAACTGGTCCCTGACCCTGAGCCAGAGCTT ATAGATAGTACCAAGCTGATTGAGGTACAAGTTGTTCTCATATTGGCCTACTGCTCCATC ATCTTGCTTGGGGTAATTGGCAACTCCTTGGTGATCCATGTGGTGATCAAATTCAAGAGC ATGCGCACAGTAACCAACTTTTTCATTGCCAATCTGGCTGTGGCAGATCTTTTGGTGAAC ACTCTGTGTCTACCGTTCACTCTTACCTATACCTTAATGGGGGAGTGGAAAATGGGTCCT GTCCTGTGCCACCTGGTGCCCTATGCCCAGGGCCTGGCAGTACAAGTATCCACAATCACC TTGACAGTAATTGCCCTGGACCGGCACAGGTGCATCGTCTACCACCTAGAGAGCAAGATC TCCAAGCGAATCAGCTTCCTGATTATTGGCTTGGCCTGGGGCATCAGTGCCCTGCTGGCA AGTCCCCTGGCCATCTTCCGGGAGTATTCGCTGATTGAGATCATCCCGGACTTTGAGATT GTGGCCTGTACTGAAAAGTGGCCTGGCGAGGAGAAGAGCATCTATGGCACTGTCTATAGT CTTTCTTCCTTGTTGATCTTGTATGTTTTGCCTCTGGGCATTATATCATTTTCCTACACT CGCATTTGGAGTAAATTGAAGAACCATGTCAGTCCTGGAGCTGCAAATGACCACTACCAT CAGCGAAGGCAAAAAACCACCAAAATGCTGGTGTGTGTGGTGGTGGTGTTTGCGGTCAGC TGGCTGCCTCTCCATGCCTTCCAGCTTGCCGTTGACATTGACAGCCAGGTCCTGGACCTG AAGGAGTACAAACTCATCTTCACAGTGTTCCACATTATCGCCATGTGCTCCACTTTTGCC AATCCCCTTCTCTATGGCTGGATGAACAGCAACTACAGAAAGGCTTTCCTCTCGGCCTTC CGCTGTGAGCAGCGGTTGGATGCCATTCACTCTGAGGTGTCCGTGACATTCAAGGCTAAA AAGAACCTGGAGGTCAGAAAGAACAGTGGCCCCAATGACTCTTTCACAGAGGCTACCAAT GTC
Cloned ORF protein sequence for pF1KB8817 Download>KIBB8817 381 aa MGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSI ILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGP VLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLA SPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYT RIWSKLKNHVSPGAANDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDL KEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAK KNLEVRKNSGPNDSFTEATNV
Nucleotide Sequence (with vector) for pF1KB8817 Download>pF1KB8817 4256 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGTCCAATA GGTGCAGAGGCTGATGAGAACCAGACAGTGGAAGAAATGAAGGTGGAACAATACGGGCCA CAAACAACTCCTAGAGGTGAACTGGTCCCTGACCCTGAGCCAGAGCTTATAGATAGTACC AAGCTGATTGAGGTACAAGTTGTTCTCATATTGGCCTACTGCTCCATCATCTTGCTTGGG GTAATTGGCAACTCCTTGGTGATCCATGTGGTGATCAAATTCAAGAGCATGCGCACAGTA ACCAACTTTTTCATTGCCAATCTGGCTGTGGCAGATCTTTTGGTGAACACTCTGTGTCTA CCGTTCACTCTTACCTATACCTTAATGGGGGAGTGGAAAATGGGTCCTGTCCTGTGCCAC CTGGTGCCCTATGCCCAGGGCCTGGCAGTACAAGTATCCACAATCACCTTGACAGTAATT GCCCTGGACCGGCACAGGTGCATCGTCTACCACCTAGAGAGCAAGATCTCCAAGCGAATC AGCTTCCTGATTATTGGCTTGGCCTGGGGCATCAGTGCCCTGCTGGCAAGTCCCCTGGCC ATCTTCCGGGAGTATTCGCTGATTGAGATCATCCCGGACTTTGAGATTGTGGCCTGTACT GAAAAGTGGCCTGGCGAGGAGAAGAGCATCTATGGCACTGTCTATAGTCTTTCTTCCTTG TTGATCTTGTATGTTTTGCCTCTGGGCATTATATCATTTTCCTACACTCGCATTTGGAGT AAATTGAAGAACCATGTCAGTCCTGGAGCTGCAAATGACCACTACCATCAGCGAAGGCAA AAAACCACCAAAATGCTGGTGTGTGTGGTGGTGGTGTTTGCGGTCAGCTGGCTGCCTCTC CATGCCTTCCAGCTTGCCGTTGACATTGACAGCCAGGTCCTGGACCTGAAGGAGTACAAA CTCATCTTCACAGTGTTCCACATTATCGCCATGTGCTCCACTTTTGCCAATCCCCTTCTC TATGGCTGGATGAACAGCAACTACAGAAAGGCTTTCCTCTCGGCCTTCCGCTGTGAGCAG CGGTTGGATGCCATTCACTCTGAGGTGTCCGTGACATTCAAGGCTAAAAAGAACCTGGAG GTCAGAAAGAACAGTGGCCCCAATGACTCTTTCACAGAGGCTACCAATGTCGTTTAAACG AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
more Linker info
