RNF39 ORF clone FXC02302

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Flexi ORF Clone FXC02302

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Clone info.

Species

human

Clone Name

pF1KB7180 Sequence (with vector) Restriction Map

Product ID

FXC02302

HaloTag Clone PID

FHC02302

ORF Sequence

DNA sequence (1260 bp)
Protein sequence (420 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464177]

Gene

KIBB7180

Symbol

RNF39

Alias : FAP216, HZF, HZFW, LIRF

Description

ring finger protein 39, transcript variant 1

Original Clone ID

oc00484

Features of the cloned ORF sequence

Description

Length: 1260 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 420 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4673.1 7.9e-142 100.0 RNF39 CCDS4674.1 1.2e-107 84.3 RNF39 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 226 243 PR01407 Butyrophylin-like IPR003879 243 260 PR01407 Butyrophylin-like IPR003879 266 290 PR01407 Butyrophylin-like IPR003879 311 324 PR01407 Butyrophylin-like IPR003879 356 380 PR01407 Butyrophylin-like HMMPfam IPR018957 88 134 PF00097 Zinc finger IPR003877 282 405 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 88 134 SM00184 Zinc finger IPR006574 227 280 SM00589 SPRY-associated IPR018355 281 419 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 88 134 PS50089 Zinc finger IPR001870 210 420 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_079512 420 607524 100.0 100.0 NP_739575 354 607524 84.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7180 Download

>KIBB7180  1260 bp
ATGTGGTGGAGAGATTTGACGAGACTGAGACTCTGGTTGAAGAGAGAGGCAATCCCAGGA
GAGGGGCGGAAAGCGGCAAAAGTTAATGCGGGAGTCGGAGAGAAGGGCATCTACACAGCA
AGCAGCAGGGGCGGCCCGCCATCTGCGCGCTCGAAGGCGGTCACGGTGGTCGCGGAAGGG
GCGGCGTCCAGATCCTGGCTTTCCATGGATGCGCCCGAGCTGGGCCCGGGGCTGGTGGAG
CGTCTGGAGCAGCTGGCGACGTGTCCTCTGTGCGGGGGCTCCTTCGAGGACCCGGTGCTT
CTGGCGTGCGAGCACAGCTTCTGCCGCGCGTGTCTGGCCCGCCGCTGGGGGACTCCGCCG
GCGACCGGCACCGAGGCTTCCCCCACCGCCTGTCCCTGCTGCGGCCTGCCGTGTCCCCGC
CGCAGCCTGAGGTCTAATGTGCGGCTGGCGGTGGAGGTGCGAATCAGCCGCGAGCTGCGA
GAGAAGCTGGCTGAGCCTGGGGCCCGTGCGGGGAGACGCCGAGGGGGGCGCATCCCCACC
ATGGGCTGCCTGGACCTGCCCGGAGAGGATATGAGGAAGACATGGAGACGATTTGAAGTC
CCAACATCCAAGTCATCTAATTCAGAGGATGATCTCCCTGAAGATTATCCAGTGGTCAAA
AAAATGCTTCATAGACTGACAGCCGACCTGACCCTGGACCCTGGGACCGCACACCGCCGC
CTGCTCATCTCCGCCGACCGCCGCAGCGTACAACTGGCCCCACCAGGGACGCCCGCGCCC
CCTGACGGCCCCAAGCGCTTCGATCAGCTCCCAGCTGTGCTGGGTGCGCAGGGCTTCGGG
GCCGGCCGCCACTGCTGGGAGGTGGAGACTGCGGACGCCGCCTCCTGCAGAGACTCTTCT
GGGGAGGATGCGGACGACGAGGAGAGCCACTATGCAGTGGGCGCGGCCGGGGAATCAGTG
CAACGCAAGGGCTGCGTAAGGCTGTGCCCTGCGGGGGCCGTGTGGGCCGTGGAGGGCCGC
GGCGGCCGCCTGTGGGCCCTCACGGCACCCGAACCCACCCTGCTGGGCGGTGTTGAGCCC
CCGCCGCGGCGCATTCGCGTGGACCTGGACTGGGAGCGGGGCCGCGTGGCCTTCTACGAC
GGCCGCTCACTCGACCTGCTTTACGCCTTCCAGGCGCCTGGCCCCCTGGGGGAGCGCATC
TTCCCGCTGTTCTGCACCTGCGACCCTCGTGCTCCGCTCCGCATTGTACCAGCGGAAAGC

ORF Protein

Cloned ORF protein sequence for pF1KB7180 Download

>KIBB7180  420 aa
MWWRDLTRLRLWLKREAIPGEGRKAAKVNAGVGEKGIYTASSRGGPPSARSKAVTVVAEG
AASRSWLSMDAPELGPGLVERLEQLATCPLCGGSFEDPVLLACEHSFCRACLARRWGTPP
ATGTEASPTACPCCGLPCPRRSLRSNVRLAVEVRISRELREKLAEPGARAGRRRGGRIPT
MGCLDLPGEDMRKTWRRFEVPTSKSSNSEDDLPEDYPVVKKMLHRLTADLTLDPGTAHRR
LLISADRRSVQLAPPGTPAPPDGPKRFDQLPAVLGAQGFGAGRHCWEVETADAASCRDSS
GEDADDEESHYAVGAAGESVQRKGCVRLCPAGAVWAVEGRGGRLWALTAPEPTLLGGVEP
PPRRIRVDLDWERGRVAFYDGRSLDLLYAFQAPGPLGERIFPLFCTCDPRAPLRIVPAES

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7180 Download

>pF1KB7180  4373 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGGTGGAGA
GATTTGACGAGACTGAGACTCTGGTTGAAGAGAGAGGCAATCCCAGGAGAGGGGCGGAAA
GCGGCAAAAGTTAATGCGGGAGTCGGAGAGAAGGGCATCTACACAGCAAGCAGCAGGGGC
GGCCCGCCATCTGCGCGCTCGAAGGCGGTCACGGTGGTCGCGGAAGGGGCGGCGTCCAGA
TCCTGGCTTTCCATGGATGCGCCCGAGCTGGGCCCGGGGCTGGTGGAGCGTCTGGAGCAG
CTGGCGACGTGTCCTCTGTGCGGGGGCTCCTTCGAGGACCCGGTGCTTCTGGCGTGCGAG
CACAGCTTCTGCCGCGCGTGTCTGGCCCGCCGCTGGGGGACTCCGCCGGCGACCGGCACC
GAGGCTTCCCCCACCGCCTGTCCCTGCTGCGGCCTGCCGTGTCCCCGCCGCAGCCTGAGG
TCTAATGTGCGGCTGGCGGTGGAGGTGCGAATCAGCCGCGAGCTGCGAGAGAAGCTGGCT
GAGCCTGGGGCCCGTGCGGGGAGACGCCGAGGGGGGCGCATCCCCACCATGGGCTGCCTG
GACCTGCCCGGAGAGGATATGAGGAAGACATGGAGACGATTTGAAGTCCCAACATCCAAG
TCATCTAATTCAGAGGATGATCTCCCTGAAGATTATCCAGTGGTCAAAAAAATGCTTCAT
AGACTGACAGCCGACCTGACCCTGGACCCTGGGACCGCACACCGCCGCCTGCTCATCTCC
GCCGACCGCCGCAGCGTACAACTGGCCCCACCAGGGACGCCCGCGCCCCCTGACGGCCCC
AAGCGCTTCGATCAGCTCCCAGCTGTGCTGGGTGCGCAGGGCTTCGGGGCCGGCCGCCAC
TGCTGGGAGGTGGAGACTGCGGACGCCGCCTCCTGCAGAGACTCTTCTGGGGAGGATGCG
GACGACGAGGAGAGCCACTATGCAGTGGGCGCGGCCGGGGAATCAGTGCAACGCAAGGGC
TGCGTAAGGCTGTGCCCTGCGGGGGCCGTGTGGGCCGTGGAGGGCCGCGGCGGCCGCCTG
TGGGCCCTCACGGCACCCGAACCCACCCTGCTGGGCGGTGTTGAGCCCCCGCCGCGGCGC
ATTCGCGTGGACCTGGACTGGGAGCGGGGCCGCGTGGCCTTCTACGACGGCCGCTCACTC
GACCTGCTTTACGCCTTCCAGGCGCCTGGCCCCCTGGGGGAGCGCATCTTCCCGCTGTTC
TGCACCTGCGACCCTCGTGCTCCGCTCCGCATTGTACCAGCGGAAAGCGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT