Gene/Protein Characteristic Table for
FXC02280
Species
human
Product ID
FXC02280
Linker Type
Cloning Site
SgfI-PmeI
Gene
KIBB7144
Description
purinergic receptor P2Y, G-protein coupled, 10
Original Clone ID
cp01149
Length: 1017 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 339 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source O00398 1.3e-152 100.0 Putative P2Y pu... Homo sapiens BAF84827 9.4e-152 99.4 unnamed protein... Homo sapiens XP_001101720 2.4e-150 98.2 similar to G-pr... Macaca mulatta XP_001502656 1.5e-141 91.7 similar to G-pr... Equus caballus XP_549100 7.9e-138 89.9 similar to G-pr... Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR000276 36 60 PR00237 Rhodopsin-like GPCR superfamily IPR000276 69 90 PR00237 Rhodopsin-like GPCR superfamily IPR002286 83 94 PR01157 P2 purinoceptor IPR002286 106 123 PR01157 P2 purinoceptor IPR000276 113 135 PR00237 Rhodopsin-like GPCR superfamily IPR000276 199 222 PR00237 Rhodopsin-like GPCR superfamily IPR000276 241 265 PR00237 Rhodopsin-like GPCR superfamily IPR002286 255 266 PR01157 P2 purinoceptor IPR000276 287 313 PR00237 Rhodopsin-like GPCR superfamily HMMPfam IPR000276 51 305 PF00001 Rhodopsin-like GPCR superfamily ProfileScan IPR000276 51 305 PS50262 Rhodopsin-like GPCR superfamily
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 39 TTYILIFIPGLLANSAALWVLCR 61 PRIMARY 23 2 71 IFMINLSVADLAHVLSLPLRIYY 93 SECONDARY 23 3 118 YASICFLTCISLQRCFFLLKPF 139 SECONDARY 22 4 150 VGISAAIWIVVGTACLPFPILRS 172 SECONDARY 23 5 196 VGMITVAELAGFVIPVIIIAWCT 218 PRIMARY 23 6 240 KALRMVFMCAAVFFICFTPYHIN 262 PRIMARY 23 7 281 RIALYFHPFCLCLASLCCLLDPI 303 PRIMARY 23
Result of homology search against disease genes in OMIM database
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055314 339 300529 100.0 100.0 NP_938147 339 300529 100.0 100.0 NP_005287 370 300086 70.4 87.0 NP_005758 344 609239 68.2 87.9 NP_005282 367 603071 63.9 88.5 Inquiries or Suggestions ?
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