GGA1 ORF clone FXC02169

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Flexi ORF Clone FXC02169

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Clone info.

Species

human

Clone Name

pF1KB5181 Sequence (with vector) Restriction Map

Product ID

FXC02169

HaloTag Clone PID

FHC02169

ORF Sequence

DNA sequence (1968 bp)
Protein sequence (656 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463055]

Gene

KIBB5181

Symbol

GGA1

Description

golgi-associated, gamma adaptin ear containing, ARF binding protein 1

Original Clone ID

oc00038

Features of the cloned ORF sequence

Description

Length: 1968 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 656 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13951.1 9.6e-131 97.4 GGA1 CCDS54526.1 1.5e-129 100.0 GGA1 CCDS33643.1 6.1e-62 84.1 GGA1 CCDS11717.1 5.1e-34 48.7 GGA3 CCDS10611.1 2.3e-31 46.4 GGA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002014 8 69 PF00790 VHS IPR002014 85 160 PF00790 VHS IPR004152 223 322 PF03127 GAT IPR008152 525 648 PF02883 Clathrin adaptor HMMSmart IPR018205 10 160 SM00288 VHS subgroup IPR008152 524 648 SM00809 Clathrin adaptor ProfileScan IPR002014 17 164 PS50179 VHS IPR004152 188 316 PS50909 GAT IPR008153 527 648 PS50180 Clathrin adaptor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011528424 656 606004 100.0 100.0 XP_005261574 656 606004 100.0 100.0 XP_011528425 648 606004 100.0 97.9 XP_005261575 631 606004 97.4 97.9 XP_016884249 639 606004 97.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5181 Download

>KIBB5181  1968 bp
ATGGAGCCCGCGATGGAGCCGGAGACTCTGGAGGCGCGAATCAATAGAGCCACGAACCCC
CTGAACAAGGAGCTCGACTGGGCCAGCATCAACGGCTTCTGCGAGCAGCTCAACGAGGAC
TTTGAGGGGCCTCCACTCGCCACCCGGCTGCTGGCCCACAAGATCCAGTCCCCACAGGAG
TGGGAGGCGATCCAGGCCTTGACGGTGAGAAGGGGAGAGGCCACCATCCGTCCCCCGCCA
TGTGACGACACCAAGGTGCTGGAAACATGCATGAAGAGCTGCGGCAAGCGGTTCCACGAC
GAAGTGGGCAAGTTCCGCTTTCTCAACGAGCTCATCAAGGTCGTGTCTCCCAAGTATCTG
GGCTCTCGGACATCGGAGAAGGTGAAGAACAAGATCTTGGAGCTCCTCTACAGCTGGACA
GTGGGCCTGCCCGAGGAGGTGAAAATCGCAGAGGCCTACCAGATGCTAAAGAAGCAGGGG
ATTGTAAAGTCCGACCCCAAGCTTCCAGATGACACTACCTTTCCCCTTCCTCCTCCACGG
CCGAAGAATGTGATCTTTGAAGATGAGGAGAAATCCAAGATGCTGGCCCGCCTGCTGAAG
AGCTCCCATCCCGAAGACCTCCGCGCAGCCAATAAGCTCATCAAAGAGATGGTGCAGGAG
GACCAGAAGCGGATGGAGAAGATCTCGAAGAGGGTGAATGCCATCGAGGAGGTGAACAAC
AATGTGAAACTGCTCACGGAGATGGTGATGAGCCACAGCCAGGGCGGCGCAGCAGCTGGC
AGCAGCGAGGACCTCATGAAGGAACTGTACCAGCGCTGTGAGCGGATGCGGCCCACGCTC
TTCCGACTGGCGAGTGACACAGAGGACAATGATGAGGCCTTAGCGGAGATCCTGCAGGCC
AATGACAACCTCACCCAGGTGATCAACCTGTATAAGCAGCTGGTGCGGGGTGAGGAGGTC
AACGGTGATGCCACAGCCGGCTCCATCCCTGGGAGCACCTCGGCCCTGCTGGATCTCTCA
GGCCTGGATCTCCCGCCTGCGGGCACCACCTACCCAGCTATGCCCACCCGCCCTGGCGAG
CAGGCCAGCCCTGAGCAGCCCAGTGCCTCAGTTTCCCTGCTTGACGACGAGCTCATGTCT
CTGGGCCTCAGTGACCCCACACCCCCTTCAGGCCCAAGCCTGGATGGTACCGGATGGAAC
AGCTTCCAGTCGTCGGATGCCACTGAGCCCCCAGCCCCTGCTCTGGCCCAGGCCCCCAGT
ATGGAAAGCCGACCCCCAGCGCAGACATCCCTGCCAGCAAGCAGCGGTCTGGACGACCTA
GACCTCCTGGGGAAGACCCTCCTGCAGCAGTCGCTGCCCCCGGAATCCCAGCAAGTGCGG
TGGGAGAAGCAGCAGCCAACCCCCCGGCTCACACTCCGGGACCTGCAGAATAAGAGCAGC
AGCTGCAGCTCCCCCAGCTCCAGCGCCACCAGCCTTCTCCACACCGTGTCCCCAGAGCCC
CCCAGGCCTCCGCAGCAGCCCGTACCAACCGAGCTCTCACTGGCCAGCATCACTGTGCCC
CTGGAGTCCATCAAACCCAGCAACATCCTGCCCGTGACTGTGTATGACCAGCACGGCTTC
CGCATCCTCTTCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTGCTGGTGGTG
GTGGTTTCCATGCTGAGCACCGCCCCCCAGCCCATCCGCAACATCGTGTTCCAGTCAGCT
GTCCCCAAGGTTATGAAGGTGAAGCTGCAGCCACCCTCGGGCACGGAGCTGCCAGCTTTT
AACCCCATCGTCCACCCCTCAGCAATCACCCAGGTCCTGCTGCTTGCCAACCCCCAGAAG
GAGAAGGTTCGCCTCCGCTACAAGCTCACCTTCACCATGGGTGACCAGACCTACAACGAG
ATGGGGGATGTGGACCAGTTCCCCCCACCTGAAACCTGGGGTAGCCTC

ORF Protein

Cloned ORF protein sequence for pF1KB5181 Download

>KIBB5181  656 aa
MEPAMEPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQE
WEAIQALTVRRGEATIRPPPCDDTKVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYL
GSRTSEKVKNKILELLYSWTVGLPEEVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPR
PKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNN
NVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQA
NDNLTQVINLYKQLVRGEEVNGDATAGSIPGSTSALLDLSGLDLPPAGTTYPAMPTRPGE
QASPEQPSASVSLLDDELMSLGLSDPTPPSGPSLDGTGWNSFQSSDATEPPAPALAQAPS
MESRPPAQTSLPASSGLDDLDLLGKTLLQQSLPPESQQVRWEKQQPTPRLTLRDLQNKSS
SCSSPSSSATSLLHTVSPEPPRPPQQPVPTELSLASITVPLESIKPSNILPVTVYDQHGF
RILFHFARDPLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELPAF
NPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDVDQFPPPETWGSL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5181 Download

>pF1KB5181  5081 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGCCCGCG
ATGGAGCCGGAGACTCTGGAGGCGCGAATCAATAGAGCCACGAACCCCCTGAACAAGGAG
CTCGACTGGGCCAGCATCAACGGCTTCTGCGAGCAGCTCAACGAGGACTTTGAGGGGCCT
CCACTCGCCACCCGGCTGCTGGCCCACAAGATCCAGTCCCCACAGGAGTGGGAGGCGATC
CAGGCCTTGACGGTGAGAAGGGGAGAGGCCACCATCCGTCCCCCGCCATGTGACGACACC
AAGGTGCTGGAAACATGCATGAAGAGCTGCGGCAAGCGGTTCCACGACGAAGTGGGCAAG
TTCCGCTTTCTCAACGAGCTCATCAAGGTCGTGTCTCCCAAGTATCTGGGCTCTCGGACA
TCGGAGAAGGTGAAGAACAAGATCTTGGAGCTCCTCTACAGCTGGACAGTGGGCCTGCCC
GAGGAGGTGAAAATCGCAGAGGCCTACCAGATGCTAAAGAAGCAGGGGATTGTAAAGTCC
GACCCCAAGCTTCCAGATGACACTACCTTTCCCCTTCCTCCTCCACGGCCGAAGAATGTG
ATCTTTGAAGATGAGGAGAAATCCAAGATGCTGGCCCGCCTGCTGAAGAGCTCCCATCCC
GAAGACCTCCGCGCAGCCAATAAGCTCATCAAAGAGATGGTGCAGGAGGACCAGAAGCGG
ATGGAGAAGATCTCGAAGAGGGTGAATGCCATCGAGGAGGTGAACAACAATGTGAAACTG
CTCACGGAGATGGTGATGAGCCACAGCCAGGGCGGCGCAGCAGCTGGCAGCAGCGAGGAC
CTCATGAAGGAACTGTACCAGCGCTGTGAGCGGATGCGGCCCACGCTCTTCCGACTGGCG
AGTGACACAGAGGACAATGATGAGGCCTTAGCGGAGATCCTGCAGGCCAATGACAACCTC
ACCCAGGTGATCAACCTGTATAAGCAGCTGGTGCGGGGTGAGGAGGTCAACGGTGATGCC
ACAGCCGGCTCCATCCCTGGGAGCACCTCGGCCCTGCTGGATCTCTCAGGCCTGGATCTC
CCGCCTGCGGGCACCACCTACCCAGCTATGCCCACCCGCCCTGGCGAGCAGGCCAGCCCT
GAGCAGCCCAGTGCCTCAGTTTCCCTGCTTGACGACGAGCTCATGTCTCTGGGCCTCAGT
GACCCCACACCCCCTTCAGGCCCAAGCCTGGATGGTACCGGATGGAACAGCTTCCAGTCG
TCGGATGCCACTGAGCCCCCAGCCCCTGCTCTGGCCCAGGCCCCCAGTATGGAAAGCCGA
CCCCCAGCGCAGACATCCCTGCCAGCAAGCAGCGGTCTGGACGACCTAGACCTCCTGGGG
AAGACCCTCCTGCAGCAGTCGCTGCCCCCGGAATCCCAGCAAGTGCGGTGGGAGAAGCAG
CAGCCAACCCCCCGGCTCACACTCCGGGACCTGCAGAATAAGAGCAGCAGCTGCAGCTCC
CCCAGCTCCAGCGCCACCAGCCTTCTCCACACCGTGTCCCCAGAGCCCCCCAGGCCTCCG
CAGCAGCCCGTACCAACCGAGCTCTCACTGGCCAGCATCACTGTGCCCCTGGAGTCCATC
AAACCCAGCAACATCCTGCCCGTGACTGTGTATGACCAGCACGGCTTCCGCATCCTCTTC
CATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTGCTGGTGGTGGTGGTTTCCATG
CTGAGCACCGCCCCCCAGCCCATCCGCAACATCGTGTTCCAGTCAGCTGTCCCCAAGGTT
ATGAAGGTGAAGCTGCAGCCACCCTCGGGCACGGAGCTGCCAGCTTTTAACCCCATCGTC
CACCCCTCAGCAATCACCCAGGTCCTGCTGCTTGCCAACCCCCAGAAGGAGAAGGTTCGC
CTCCGCTACAAGCTCACCTTCACCATGGGTGACCAGACCTACAACGAGATGGGGGATGTG
GACCAGTTCCCCCCACCTGAAACCTGGGGTAGCCTCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAA
AAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTT
TTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTT
TTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTG
TTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCA
GATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGT
AGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGA
TAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTC
GGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACT
GAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGA
CAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGG
AAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATT
TTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTT
ACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGA
TTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT