CELF3 ORF clone FXC01836

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Flexi ORF Clone FXC01836

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Clone info.

Species

human

Clone Name

pF1KB7008 Sequence (with vector) Restriction Map

Product ID

FXC01836

HaloTag Clone PID

FHC01836

Original Clone PID

ORK01836

ORF Sequence

DNA sequence (1395 bp)
Protein sequence (465 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385174]

Gene

KIBB7008

Symbol

CELF3

Alias : BRUNOL1, CAGH4, ERDA4, ETR-1, TNRC4

Description

CUGBP, Elav-like family member 3, transcript variant 1

Original Clone ID

ff04527

Features of the cloned ORF sequence

Description

Length: 1395 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 465 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1002.1 2.6e-79 100.0 CELF3 CCDS45858.1 3.5e-43 64.0 CELF4 CCDS53367.1 1.3e-41 89.2 CELF3 CCDS10242.1 6.5e-38 68.7 CELF6 CCDS12106.1 1.1e-36 66.0 CELF5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 9 76 PF00076 RNA recognition motif domain IPR000504 97 161 PF00076 RNA recognition motif domain IPR000504 382 451 PF00076 RNA recognition motif domain HMMSmart IPR000504 8 84 SM00360 RNA recognition motif domain IPR000504 96 171 SM00360 RNA recognition motif domain IPR000504 381 454 SM00360 RNA recognition motif domain ProfileScan IPR000504 7 88 PS50102 RNA recognition motif domain IPR000504 95 175 PS50102 RNA recognition motif domain IPR000504 380 458 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_009116 465 612678 100.0 100.0 NP_001278035 464 612678 99.8 100.0 NP_001278036 464 612678 99.8 100.0 NP_001166119 418 612678 100.0 89.7 XP_011507414 389 612678 100.0 83.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7008 Download

>KIBB7008  1395 bp
ATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAG
AAGGACCTGAAGCCCATCTTCGAACAGTTTGGTCGGATCTTTGAGCTGACTGTCATCAAG
GACAAGTACACCGGGCTGCACAAGGGATGTGCCTTCCTGACATACTGTGCCCGGGATTCA
GCCCTGAAGGCCCAGAGCGCCCTGCACGAACAGAAGACGCTTCCAGGGATGAACAGGCCG
ATCCAGGTCAAGCCAGCCGACAGCGAGAGCCGAGGAGAAGACCGGAAGCTCTTTGTGGGG
ATGCTAGGGAAGCAGCAGACAGATGAGGACGTCCGGAAGATGTTTGAGCCCTTCGGGACC
ATCGACGAGTGCACTGTGCTCCGGGGGCCAGATGGCACCAGCAAAGGCTGCGCCTTCGTG
AAGTTCCAGACCCACGCTGAGGCCCAGGCGGCCATCAACACCCTTCACAGCAGCCGGACC
CTGCCAGGTGCCTCGTCCAGCCTGGTGGTGAAGTTTGCTGACACTGAGAAGGAGCGAGGT
CTCCGCCGCATGCAGCAGGTGGCCACCCAGTTGGGCATGTTCAGCCCCATCGCCCTCCAG
TTTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCG
GCTCACAGTGCCTACCTCAGCCCCATGGCCACCATGGCTGCCGTGCAGATGCAGCACATG
GCTGCCATCAATGCCAATGGCCTCATCGCCACCCCCATCACCCCATCCTCAGGAACCAGC
ACCCCTCCTGCCATCGCTGCCACGCCTGTCTCTGCCATTCCGGCTGCCCTGGGCGTCAAC
GGCTACAGCCCGGTGCCCACCCAGCCCACTGGGCAGCCTGCCCCTGATGCTCTGTATCCC
AACGGGGTTCACCCCTACCCAGCCCAGAGCCCCGCGGCCCCCGTGGACCCCCTGCAGCAG
GCCTACGCGGGGATGCAGCACTACACAGCAGCCTACCCAGCAGCCTACAGCCTGGTTGCA
CCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAACAG
CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAAAGAGAAGGCCCTGATGGCTGC
AACATCTTCATCTACCACCTGCCCCAGGAGTTCACTGACTCAGAGATCCTCCAGATGTTT
GTCCCCTTTGGCCACGTCATCTCAGCCAAAGTCTTTGTTGACCGAGCCACCAATCAAAGC
AAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGCC
ATGAATGGCTTCCAGATCGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGAT
GCCAACCGGCCCTAC

ORF Protein

Cloned ORF protein sequence for pF1KB7008 Download

>KIBB7008  465 aa
MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS
ALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGT
IDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERG
LRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHM
AAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYP
NGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQ
QQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQS
KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7008 Download

>pF1KB7008  4508 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAGGAGCCG
GATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAGAAGGACCTGAAG
CCCATCTTCGAACAGTTTGGTCGGATCTTTGAGCTGACTGTCATCAAGGACAAGTACACC
GGGCTGCACAAGGGATGTGCCTTCCTGACATACTGTGCCCGGGATTCAGCCCTGAAGGCC
CAGAGCGCCCTGCACGAACAGAAGACGCTTCCAGGGATGAACAGGCCGATCCAGGTCAAG
CCAGCCGACAGCGAGAGCCGAGGAGAAGACCGGAAGCTCTTTGTGGGGATGCTAGGGAAG
CAGCAGACAGATGAGGACGTCCGGAAGATGTTTGAGCCCTTCGGGACCATCGACGAGTGC
ACTGTGCTCCGGGGGCCAGATGGCACCAGCAAAGGCTGCGCCTTCGTGAAGTTCCAGACC
CACGCTGAGGCCCAGGCGGCCATCAACACCCTTCACAGCAGCCGGACCCTGCCAGGTGCC
TCGTCCAGCCTGGTGGTGAAGTTTGCTGACACTGAGAAGGAGCGAGGTCTCCGCCGCATG
CAGCAGGTGGCCACCCAGTTGGGCATGTTCAGCCCCATCGCCCTCCAGTTTGGAGCCTAC
AGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCGGCTCACAGTGCC
TACCTCAGCCCCATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAAT
GCCAATGGCCTCATCGCCACCCCCATCACCCCATCCTCAGGAACCAGCACCCCTCCTGCC
ATCGCTGCCACGCCTGTCTCTGCCATTCCGGCTGCCCTGGGCGTCAACGGCTACAGCCCG
GTGCCCACCCAGCCCACTGGGCAGCCTGCCCCTGATGCTCTGTATCCCAACGGGGTTCAC
CCCTACCCAGCCCAGAGCCCCGCGGCCCCCGTGGACCCCCTGCAGCAGGCCTACGCGGGG
ATGCAGCACTACACAGCAGCCTACCCAGCAGCCTACAGCCTGGTTGCACCTGCGTTCCCG
CAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAACAGCAGCAGCAGCAG
CAGCAGCAGCAACAGCAGCAGCAGCAAAGAGAAGGCCCTGATGGCTGCAACATCTTCATC
TACCACCTGCCCCAGGAGTTCACTGACTCAGAGATCCTCCAGATGTTTGTCCCCTTTGGC
CACGTCATCTCAGCCAAAGTCTTTGTTGACCGAGCCACCAATCAAAGCAAATGTTTTGGC
TTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGCCATGAATGGCTTC
CAGATCGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGCCAACCGGCCC
TACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCT
CATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAA
GATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAA
AAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCC
GAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTA
GTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCT
GTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACG
ATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAG
CTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGC
CACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGG
AGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTT
TCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATG
GAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCA
CATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTG
AGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT