-
SpecieshumanProduct IDFXC00326Cloning SiteSgfI-PmeIGeneKIBB3009SymbolZNF202
Alias : ZKSCAN10, ZSCAN42Descriptionzinc finger protein 202, transcript variant 1Original Clone IDfj13132
Length: 1944 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 648 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS8443.1 2.6e-140 99.8 ZNF202 CCDS2715.1 2.9e-35 36.7 ZKSCAN7 CCDS11179.2 2.3e-32 35.8 ZNF287 CCDS42712.1 9.8e-31 41.3 ZNF2 CCDS12491.1 2.8e-30 38.9 ZNF565
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR003309 42 134 PF02023 Transcription regulator SCAN IPR001909 237 275 PF01352 Krueppel-associated box IPR007087 425 447 PF00096 Zinc finger IPR007087 481 503 PF00096 Zinc finger IPR007087 509 531 PF00096 Zinc finger IPR007087 594 615 PF00096 Zinc finger IPR007087 621 643 PF00096 Zinc finger HMMSmart IPR003309 42 154 SM00431 Transcription regulator SCAN IPR001909 237 297 SM00349 Krueppel-associated box IPR015880 397 419 SM00355 Zinc finger IPR015880 425 447 SM00355 Zinc finger IPR015880 481 503 SM00355 Zinc finger IPR015880 509 531 SM00355 Zinc finger IPR015880 537 559 SM00355 Zinc finger IPR015880 565 587 SM00355 Zinc finger IPR015880 593 615 SM00355 Zinc finger IPR015880 621 643 SM00355 Zinc finger ProfileScan IPR003309 46 127 PS50804 Transcription regulator SCAN IPR001909 237 308 PS50805 Krueppel-associated box IPR007087 397 424 PS50157 Zinc finger IPR007087 425 452 PS50157 Zinc finger IPR007087 481 508 PS50157 Zinc finger IPR007087 509 536 PS50157 Zinc finger IPR007087 537 564 PS50157 Zinc finger IPR007087 565 592 PS50157 Zinc finger IPR007087 593 620 PS50157 Zinc finger IPR007087 621 648 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005271717 648 603430 99.8 100.0 XP_005271716 648 603430 99.8 100.0 XP_011541274 648 603430 99.8 100.0 NP_001288709 648 603430 99.8 100.0 XP_016873757 648 603430 99.8 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB3009 Download>KIBB3009 1944 bp ATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGAAGAGGGAATTCTGATG GTGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGTCTGTCTTACAGAGGGATGACCCG GTGCTGGAAACCTCCCACCAGAACTTCCGACGCTTCCGCTACCAGGAGGCAGCAAGCCCT AGAGAAGCTCTCATCAGACTCCGAGAACTTTGTCACCAGTGGCTGAGACCAGAGAGGCGG ACAAAGGAGCAGATCCTAGAGCTGCTTGTGCTGGAACAATTTCTTACCGTCCTACCTGGA GAACTACAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAGGCAGTGACGCTG GTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTGTCCATGTTCAC GGCCAGGAAGTCCTGTCAGAGGAGACGGTGCATTTAGGAGCGGAGCCTGAGTCACCTAAT GAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAG AGCCCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAGCTCCAGACC CTGCAGGAGAGCGAGGTCCCAGTGCCCGAGGACCCAGACCTTCCTGCAGAGAGGAGCTCT GGAGACTCAGAGATGGTTGCTCTTCTTACTGCTCTGTCACAGGGACTGGTAACGTTCAAG GATGTGGCCGTATGCTTTTCCCAGGACCAGTGGAGTGATCTGGACCCAACACAGAAAGAG TTCTATGGAGAATATGTCTTGGAAGAAGACTGTGGAATTGTTGTCTCTCTGTCATTTCCA ATCCCCAGACCTGATGAGATCTCCCAGGTTAGAGAGGAAGAGCCTTGGGTCCCAGATATC CAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGG AGTAAAGATGAGGAAGAGTGTCTGGAGCAGGAAGATCTGAGTTTGGAGGATATACACAGG CCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGAC AATCCAGGTAGACTTAATGAAAGAAGATTTGGTACTAATATTTCTCAAGTGAATAGTTTT GTGAACCTTCGGGAAACTACACCCGTCCACCCCCTGTTAGGGAGGCATCATGACTGTTCT GTGTGTGGAAAGAGCTTCACTTGTAACTCCCACCTTGTTAGACACCTGAGGACTCACACA GGAGAGAAACCCTATAAATGTATGGAATGTGGAAAAAGTTACACACGAAGCTCACATCTT GCCAGGCACCAAAAGGTTCACAAGATGAACGCGCCTTACAAATATCCCCTAAACCGGAAG AATTTGGAAGAGACCTCCCCTGTGACACAGGCTGAGAGAACTCCATCAGTGGAGAAACCC TATAGATGTGATGATTGCGGAAAGCACTTCCGCTGGACTTCAGACCTTGTCAGACATCAG AGGACACATACTGGAGAAAAACCCTTCTTTTGTACTATTTGTGGCAAAAGCTTCAGCCAG AAATCTGTGTTAACAACACACCAAAGAATCCACCTGGGAGGCAAACCCTACTTGTGTGGA GAGTGTGGTGAGGACTTCAGTGAACACAGGCGGTACCTGGCGCACCGGAAGACGCACGCT GCTGAGGAACTCTACCTCTGCAGCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTC GCCAAGCACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGATGCAACGAATGTGGGAAG AGCTTCAGTCGCAGGGACCACCTCGTCAGGCATCAGAGAACACACACTGGGGAGAAACCA TTCACGTGCCCTACCTGTGGAAAAAGCTTCAGCAGAGGATATCACTTAATTAGGCATCAG AGGACCCACTCAGAAAAGACCTCC
Cloned ORF protein sequence for pF1KB3009 Download>KIBB3009 648 aa MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASP REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL VEGLQKQPRRPRRWVTVHVHGQEVLSEETVHLGAEPESPNELQDPVQSSTPEQSPEETTQ SPDLGAPAEQRPHQEEELQTLQESEVPVPEDPDLPAERSSGDSEMVALLTALSQGLVTFK DVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEISQVREEEPWVPDI QEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEIHQTPDWEIVFED NPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTCNSHLVRHLRTHT GEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPVTQAERTPSVEKP YRCDDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQRIHLGGKPYLCG ECGEDFSEHRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHASVRPCRCNECGK SFSRRDHLVRHQRTHTGEKPFTCPTCGKSFSRGYHLIRHQRTHSEKTS
Nucleotide Sequence (with vector) for pF1KB3009 Download>pF1KB3009 5057 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTACAGCC GTGGAACCAGAGGACCAGGATCTTTGGGAAGAAGAGGGAATTCTGATGGTGAAACTGGAA GATGATTTCACCTGTCGGCCAGAGTCTGTCTTACAGAGGGATGACCCGGTGCTGGAAACC TCCCACCAGAACTTCCGACGCTTCCGCTACCAGGAGGCAGCAAGCCCTAGAGAAGCTCTC ATCAGACTCCGAGAACTTTGTCACCAGTGGCTGAGACCAGAGAGGCGGACAAAGGAGCAG ATCCTAGAGCTGCTTGTGCTGGAACAATTTCTTACCGTCCTACCTGGAGAACTACAGAGC TGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAGGCAGTGACGCTGGTGGAGGGTTTG CAGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTGTCCATGTTCACGGCCAGGAAGTC CTGTCAGAGGAGACGGTGCATTTAGGAGCGGAGCCTGAGTCACCTAATGAGCTGCAGGAT CCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTG GGGGCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAGCTCCAGACCCTGCAGGAGAGC GAGGTCCCAGTGCCCGAGGACCCAGACCTTCCTGCAGAGAGGAGCTCTGGAGACTCAGAG ATGGTTGCTCTTCTTACTGCTCTGTCACAGGGACTGGTAACGTTCAAGGATGTGGCCGTA TGCTTTTCCCAGGACCAGTGGAGTGATCTGGACCCAACACAGAAAGAGTTCTATGGAGAA TATGTCTTGGAAGAAGACTGTGGAATTGTTGTCTCTCTGTCATTTCCAATCCCCAGACCT GATGAGATCTCCCAGGTTAGAGAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCTCAG GAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGGAGTAAAGATGAG GAAGAGTGTCTGGAGCAGGAAGATCTGAGTTTGGAGGATATACACAGGCCTGTTTTGGGA GAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAGA CTTAATGAAAGAAGATTTGGTACTAATATTTCTCAAGTGAATAGTTTTGTGAACCTTCGG GAAACTACACCCGTCCACCCCCTGTTAGGGAGGCATCATGACTGTTCTGTGTGTGGAAAG AGCTTCACTTGTAACTCCCACCTTGTTAGACACCTGAGGACTCACACAGGAGAGAAACCC TATAAATGTATGGAATGTGGAAAAAGTTACACACGAAGCTCACATCTTGCCAGGCACCAA AAGGTTCACAAGATGAACGCGCCTTACAAATATCCCCTAAACCGGAAGAATTTGGAAGAG ACCTCCCCTGTGACACAGGCTGAGAGAACTCCATCAGTGGAGAAACCCTATAGATGTGAT GATTGCGGAAAGCACTTCCGCTGGACTTCAGACCTTGTCAGACATCAGAGGACACATACT GGAGAAAAACCCTTCTTTTGTACTATTTGTGGCAAAAGCTTCAGCCAGAAATCTGTGTTA ACAACACACCAAAGAATCCACCTGGGAGGCAAACCCTACTTGTGTGGAGAGTGTGGTGAG GACTTCAGTGAACACAGGCGGTACCTGGCGCACCGGAAGACGCACGCTGCTGAGGAACTC TACCTCTGCAGCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACTTG AGAGGACACGCCTCAGTGAGGCCCTGCCGATGCAACGAATGTGGGAAGAGCTTCAGTCGC AGGGACCACCTCGTCAGGCATCAGAGAACACACACTGGGGAGAAACCATTCACGTGCCCT ACCTGTGGAAAAAGCTTCAGCAGAGGATATCACTTAATTAGGCATCAGAGGACCCACTCA GAAAAGACCTCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA AATATGTATCCGCTCAT
more Linker info
