AMIGO3 ORF clone FXC00287

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Flexi ORF Clone FXC00287

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Clone info.

Species

human

Clone Name

pF1KA1851 Sequence (with vector) Restriction Map

Product ID

FXC00287

HaloTag Clone PID

FHC00287

ORF Sequence

DNA sequence (1512 bp)
Protein sequence (504 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385510]

Gene

KIAA1851

Symbol

AMIGO3

Alias : ALI3, AMIGO-3

Description

adhesion molecule with Ig-like domain 3

Original Clone ID

hg04492

Features of the cloned ORF sequence

Description

Length: 1512 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 504 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33759.1 2.9e-171 100.0 AMIGO3 CCDS8751.1 6e-39 36.5 AMIGO2 CCDS30795.1 4.9e-28 37.7 AMIGO1 CCDS34969.1 9.7e-17 32.3 LRRC24 CCDS4369.1 1.6e-11 30.6 SLIT3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 184 200 PF00560 Leucine-rich repeat HMMSmart IPR003591 59 83 SM00369 Leucine-rich repeat IPR003591 84 107 SM00369 Leucine-rich repeat IPR003591 109 131 SM00369 Leucine-rich repeat IPR003591 132 155 SM00369 Leucine-rich repeat IPR003591 156 176 SM00369 Leucine-rich repeat IPR003591 183 206 SM00369 Leucine-rich repeat IPR003599 285 372 SM00409 Immunoglobulin subtype IPR003598 291 359 SM00408 Immunoglobulin subtype 2 ProfileScan IPR001611 86 107 PS51450 Leucine-rich repeat IPR001611 110 133 PS51450 Leucine-rich repeat IPR001611 134 155 PS51450 Leucine-rich repeat IPR001611 158 178 PS51450 Leucine-rich repeat IPR001611 184 207 PS51450 Leucine-rich repeat IPR007110 277 370 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MTWLVLLGTLLCMLRVGLGT 20 PRIMARY 20 2 32 HNCPYKCICAADLLSCTGLGLQD 54 SECONDARY 23 3 384 GFTTLLGCAVGLVLVLLYLFAPP 406 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_942015 504 615691 100.0 100.0 NP_862830 522 615690 36.5 97.6 XP_005268894 522 615690 36.5 97.6 NP_001137140 522 615690 36.5 97.6 XP_011540114 493 615689 37.7 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1851 Download

>KIAA1851  1512 bp
ATGACCTGGTTGGTGCTGCTGGGGACACTGCTCTGCATGCTGCGCGTTGGGTTAGGCACC
CCGGACTCCGAGGGTTTCCCGCCCCGTGCGCTCCACAACTGCCCCTACAAATGTATCTGC
GCTGCCGACCTGCTAAGCTGCACTGGCCTAGGGCTGCAGGACGTGCCAGCCGAGTTACCT
GCCGCTACTGCGGACCTCGACCTGAGCCACAACGCGCTCCAGCGCCTGCGCCCCGGCTGG
TTGGCGCCCCTCTTCCAGCTGCGCGCCCTGCACCTAGACCACAACGAACTAGATGCGCTG
GGTCGCGGCGTCTTCGTCAACGCCAGCGGCCTGAGGCTGCTCGATCTATCATCTAACACG
TTGCGGGCGCTTGGCCGCCACGACCTCGACGGGCTGGGGGCGCTGGAGAAGCTGCTTCTG
TTCAATAACCGCTTGGTGCACTTGGACGAGCATGCCTTCCACGGCCTGCGCGCGCTCAGC
CATCTCTACCTGGGCTGCAACGAACTCGCCTCGTTCTCCTTCGACCACCTGCACGGTCTG
AGCGCCACCCACCTGCTTACTCTGGACCTCTCCTCCAACCGGCTGGGACACATCTCCGTA
CCTGAGCTGGCCGCGCTGCCGGCCTTCCTCAAGAACGGCCTCTACTTGCACAACAACCCT
TTGCCTTGCGACTGCCGCCTCTACCACCTGCTACAGCGCTGGCACCAGCGGGGCCTGAGC
GCCGTGCGCGACTTTGCGCGCGAGTACGTATGCTTGGCCTTCAAGGTACCCGCGTCCCGC
GTGCGCTTCTTCCAGCACAGCCGCGTCTTTGAGAACTGCTCGTCGGCCCCAGCTCTTGGC
CTAGAGCGGCCGGAAGAGCACCTGTACGCGCTGGTGGGTCGGTCCCTGAGGCTTTACTGC
AACACCAGCGTCCCGGCCATGCGCATTGCCTGGGTTTCGCCGCAGCAGGAGCTTCTCAGG
GCGCCAGGATCCCGCGATGGCAGCATCGCGGTGCTGGCCGACGGCAGCTTGGCCATAGGC
AACGTACAGGAGCAGCATGCGGGACTCTTCGTGTGCCTGGCCACTGGGCCCCGCCTGCAC
CACAACCAGACGCACGAGTACAACGTGAGCGTGCACTTTCCGCGCCCAGAGCCCGAGGCT
TTCAACACAGGCTTCACCACACTGCTGGGCTGTGCCGTGGGCCTTGTGCTCGTGCTGCTC
TACCTGTTCGCCCCACCCTGCCGCTGCTGCCGCCGTGCCTGCCGCTGCCGCCGCTGGCCC
CAAACACCCAGCCCGCTCCAAGAGCTGAGCGCACAGTCCTCAGTACTCAGCACCACACCG
CCAGACGCACCCAGCCGCAAGGCCAGCGTCCACAAGCACGTAGTCTTTCTGGAGCCAGGC
CGGAGGGGCCTCAATGGCCGCGTGCAGCTGGCAGTAGCTGAGGAATTCGATCTCTACAAC
CCTGGAGGCCTGCAGCTGAAGGCTGGCTCTGAGTCCGCCAGCTCCATAGGCTCCGAGGGT
CCCATGACAACC

ORF Protein

Cloned ORF protein sequence for pF1KA1851 Download

>KIAA1851  504 aa
MTWLVLLGTLLCMLRVGLGTPDSEGFPPRALHNCPYKCICAADLLSCTGLGLQDVPAELP
AATADLDLSHNALQRLRPGWLAPLFQLRALHLDHNELDALGRGVFVNASGLRLLDLSSNT
LRALGRHDLDGLGALEKLLLFNNRLVHLDEHAFHGLRALSHLYLGCNELASFSFDHLHGL
SATHLLTLDLSSNRLGHISVPELAALPAFLKNGLYLHNNPLPCDCRLYHLLQRWHQRGLS
AVRDFAREYVCLAFKVPASRVRFFQHSRVFENCSSAPALGLERPEEHLYALVGRSLRLYC
NTSVPAMRIAWVSPQQELLRAPGSRDGSIAVLADGSLAIGNVQEQHAGLFVCLATGPRLH
HNQTHEYNVSVHFPRPEPEAFNTGFTTLLGCAVGLVLVLLYLFAPPCRCCRRACRCRRWP
QTPSPLQELSAQSSVLSTTPPDAPSRKASVHKHVVFLEPGRRGLNGRVQLAVAEEFDLYN
PGGLQLKAGSESASSIGSEGPMTT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1851 Download

>pF1KA1851  4625 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACCTGGTTG
GTGCTGCTGGGGACACTGCTCTGCATGCTGCGCGTTGGGTTAGGCACCCCGGACTCCGAG
GGTTTCCCGCCCCGTGCGCTCCACAACTGCCCCTACAAATGTATCTGCGCTGCCGACCTG
CTAAGCTGCACTGGCCTAGGGCTGCAGGACGTGCCAGCCGAGTTACCTGCCGCTACTGCG
GACCTCGACCTGAGCCACAACGCGCTCCAGCGCCTGCGCCCCGGCTGGTTGGCGCCCCTC
TTCCAGCTGCGCGCCCTGCACCTAGACCACAACGAACTAGATGCGCTGGGTCGCGGCGTC
TTCGTCAACGCCAGCGGCCTGAGGCTGCTCGATCTATCATCTAACACGTTGCGGGCGCTT
GGCCGCCACGACCTCGACGGGCTGGGGGCGCTGGAGAAGCTGCTTCTGTTCAATAACCGC
TTGGTGCACTTGGACGAGCATGCCTTCCACGGCCTGCGCGCGCTCAGCCATCTCTACCTG
GGCTGCAACGAACTCGCCTCGTTCTCCTTCGACCACCTGCACGGTCTGAGCGCCACCCAC
CTGCTTACTCTGGACCTCTCCTCCAACCGGCTGGGACACATCTCCGTACCTGAGCTGGCC
GCGCTGCCGGCCTTCCTCAAGAACGGCCTCTACTTGCACAACAACCCTTTGCCTTGCGAC
TGCCGCCTCTACCACCTGCTACAGCGCTGGCACCAGCGGGGCCTGAGCGCCGTGCGCGAC
TTTGCGCGCGAGTACGTATGCTTGGCCTTCAAGGTACCCGCGTCCCGCGTGCGCTTCTTC
CAGCACAGCCGCGTCTTTGAGAACTGCTCGTCGGCCCCAGCTCTTGGCCTAGAGCGGCCG
GAAGAGCACCTGTACGCGCTGGTGGGTCGGTCCCTGAGGCTTTACTGCAACACCAGCGTC
CCGGCCATGCGCATTGCCTGGGTTTCGCCGCAGCAGGAGCTTCTCAGGGCGCCAGGATCC
CGCGATGGCAGCATCGCGGTGCTGGCCGACGGCAGCTTGGCCATAGGCAACGTACAGGAG
CAGCATGCGGGACTCTTCGTGTGCCTGGCCACTGGGCCCCGCCTGCACCACAACCAGACG
CACGAGTACAACGTGAGCGTGCACTTTCCGCGCCCAGAGCCCGAGGCTTTCAACACAGGC
TTCACCACACTGCTGGGCTGTGCCGTGGGCCTTGTGCTCGTGCTGCTCTACCTGTTCGCC
CCACCCTGCCGCTGCTGCCGCCGTGCCTGCCGCTGCCGCCGCTGGCCCCAAACACCCAGC
CCGCTCCAAGAGCTGAGCGCACAGTCCTCAGTACTCAGCACCACACCGCCAGACGCACCC
AGCCGCAAGGCCAGCGTCCACAAGCACGTAGTCTTTCTGGAGCCAGGCCGGAGGGGCCTC
AATGGCCGCGTGCAGCTGGCAGTAGCTGAGGAATTCGATCTCTACAACCCTGGAGGCCTG
CAGCTGAAGGCTGGCTCTGAGTCCGCCAGCTCCATAGGCTCCGAGGGTCCCATGACAACC
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT