information on F19F18
(85319..85828)
Direction: +
Frame: 2
ORF
84515..87037 (Met: 84557 84794 84800 84824 85034 85190 85426 85955 86102 86120 86186 86234 86264 86408 86501 86666 86951 86978 85334 85429 85446)
NRYIFVLIDDYSRYMWSLLLKEKSEAFNKFKSFKACVEQETGATIKTFRTDRGGEFVSQE
FQAFCDASGIKRHLTAPYSPQQNGVVERRNRTLMEMTRSILKHMSVPNYLWGEAVRHSTY
LINRVATRTLVDQTPYKVLKSKKPNVEHLRVFGCIGYAKAEAVHLRKLDDRSRMLVHLGT
EPGSKGYRLLDPTRRKVIVSRDVVFDEEKRWKWNNSEDEINNVPGMFSLSFEEFGNNGIR
EEDDITEETEINDGENHDREAEIPTQAIETVEQ*RAASHTKKIRESDLKTKLLRRLCFVG
LNRM*GSYL*NEEPWDYNEAKELQEWKKACVEEIASITKNHTWDLVDLPIGAKPIGLKWV
FKLKRNSDGSVNKHKARLVAKGYVQRHGIDFDEVFAPVARIETVRLIIALAASNGWEIHH
LDVKTAFLHGELKEVVYVSQPEGFVIGGSEDKVYKLNKALYGLKQAPRAWNNKLNKILME
LKFTKCSKEPSLYCRRDKDELLVVVVYVDDLLVTGSNLQVILEFKEEMAKKFEMSDLGKL
TYYLGIEVFQHEGGIMLKQERYANKILEETKMDDCNAVQIPMDANLKLSKAQEEKNIDEK
EYRRNIGCLRYLLHTRPDLSYCVGVLSRYMHEPKESHGAALKQILRYLRGTQSFGLCFKR
MNKTELVGFSDSSHNVDEDDGRSTTGHIFYLNDCPITWCSQKQETVALSSCEAEFMAATE
AAKQAVWLQELLEEIVGKTCKQVLILIDNKSAIALTKNPVFHGRSKHIHKRYHFIRECVA
NEQVEVEHVPGTEQRADILTKALGRIKFKEMRDLVGVQDMTKCSFKLKGENVGVSLKLT
GenBank annotation
None
BLASTX cluster
82913..87034 cluster 9 89 hits for protein gene
BLASTN cluster
None
GENSCAN
82913..85333 gene model 22
85445..87037 gene model 23
Grail
83027..84514 exon Phase: 0 Score: 99
84557..85336 exon Phase: 0 Score: 78
85445..86457 exon Phase: 0 Score: 59
86514..87040 exon Phase: 1 Score: 80
Exon-Intron boundary candidatates
| Acceptor |
| 84578 [0.008] (0) |
84584 [0.002] (0) |
84617 [0.017] (0) |
84670 [0.003] (2) |
| 84730 [0.025] (2) |
84886 [0.147] (2) |
84891 [0.001] (1) |
84909 [0.002] (1) |
| 84996 [0.013] (1) |
85020 [0.002] (1) |
85050 [0.001] (1) |
85086 [0.006] (1) |
| 85117 [0.010] (2) |
85188 [0.046] (1) |
85212 [0.014] (1) |
85254 [0.011] (1) |
| 85320 [0.001] (1) |
85341 [0.007] (1) |
85458 [0.002] (1) |
85755 [0.038] (1) |
| 85848 [0.005] (1) |
85860 [0.007] (1) |
86008 [0.002] (2) |
86154 [0.073] (1) |
| 86163 [0.004] (1) |
86178 [0.139] (1) |
86258 [0.020] (0) |
86401 [0.77N/0.003] (2) |
| 86404 [0.86N/0.078] (2) |
86514 [0.020] (1) |
86523 [0.005] (1) |
86530 [0.009] (2) |
| 86539 [0.094] (2) |
86658 [0.004] (1) |
86679 [0.004] (1) |
86871 [0.001] (1) |
| 86992 [0.003] (2) |
| Donor |
| 84519 [1.00N/0.841] (2) |
84789 [0.004] (2) |
84856 [0.011] (0) |
84935 [0.103] (1) |
| 85102 [0.100] (0) |
85143 [0.008] (2) |
85366 [0.034] (0) |
85506 [0.006] (2) |
| 85664 [0.004] (1) |
85682 [0.004] (1) |
86153 [0.013] (1) |
86202 [0.524] (2) |
| 86457 [0.830] (2) |
86567 [0.034] (1) |
86576 [0.014] (1) |
86695 [0.009] (0) |
| 86738 [0.153] (1) |
86832 [0.074] (2) |
87019 [0.062] (0) |
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