BLASTX alignment cluster 9    (82913..87034)

Local alignments in this cluster

gi|4006831[fasta] (AC005970) putative reverse transcriptase [Arabidopsis thaliana]
Length 1200 aa
position (link: detail on the area) subject position direction score
82913..83065 (1..51) + 382
83132..83500 (32..154) + 443
83711..83764 (198..215) + 65
83750..83869 (215..254) + 86
83873..85165 (254..684) + 1733
85361..85903 (752..932) + 744
86060..86410 (941..1057) + 282
86402..86560 (1037..1089) + 200
86708..87034 (1090..1198) + 417

gi|4263547|gb|AAD15361|[fasta] (AC006250) putative retrotransposon pol protein [Arabidopsis thaliana]
Length 767 aa
position (link: detail on the area) subject position direction score
83753..84766 (26..363) + 194
85049..85165 (363..401) + 145
85592..85999 (473..608) + 558
86390..86500 (614..650) + 113
86495..86848 (650..767) + 477

gi|4335731|gb|AAD17409|[fasta] (AC006248) putative polyprotein [Arabidopsis thaliana]
Length 1347 aa
position (link: detail on the area) subject position direction score
82961..83074 (4..41) + 434
83081..83398 (65..170) + 133
83399..83593 (170..234) + 70
83660..83728 (265..287) + 81
83762..84049 (286..381) + 101
84041..84175 (378..422) + 79
84281..84661 (456..582) + 323
84698..84910 (585..655) + 194
84908..85168 (656..742) + 176
85442..86266 (831..1105) + 617
86288..86974 (1115..1343) + 478

gi|3777527[fasta] (AF053008) gag-pol polyprotein [Glycine max]
Length 1550 aa
position (link: detail on the area) subject position direction score
83090..83428 (53..165) + 211
83687..83794 (275..310) + 59
83882..84052 (536..592) + 98
84269..84376 (662..697) + 88
84371..85174 (697..964) + 473
85457..86722 (1041..1462) + 806
86762..86971 (1475..1544) + 172

gi|130582|sp|P10978|POLX_TOBAC[fasta] RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON TNT 1-94 [CONTAINS: PROTEASE ; REVERSE TRANSCRIPTASE ; ENDONUCLEASE]
gi|100342|pir||S04273 hypothetical protein - common tobacco
gi|20045|emb|CAA32025| (X13777) ORF [Nicotiana tabacum]
Length 1328 aa
position (link: detail on the area) subject position direction score
83687..83791 (232..266) + 71
83873..84097 (291..365) + 91
84170..84346 (388..446) + 68
84428..85141 (471..708) + 519
85484..86008 (822..996) + 459
86183..86320 (1058..1103) + 80
86363..86494 (1125..1168) + 128
86516..86725 (1175..1244) + 153
86741..86971 (1249..1325) + 173

show all (89) hits

   gi|1167523|dbj|BAA11674|
   gi|4263650|gb|AAD15372|
   gi|4416302|gb|AAD20307|
   gi|4567277|gb|AAD23690.1|AC006841_18
   gi|2586082
   gi|4388818|gb|AAD19773|
   gi|3402755|emb|CAA20201.1|
   gi|3645899
   gi|3687234
   gi|1769898|emb|CAA69272|
   gi|85105|pir||S00954
   gi|4572668|gb|AAD23883.1|AC006954_4
   gi|4512618|gb|AAD21687.1|
   gi|2642431
   gi|3319362
   gi|4388829|gb|AAD19784|
   gi|2961349|emb|CAA18107.1|
   gi|99721|pir||S05465
   gi|4335736|gb|AAD17414|
   gi|4539406|emb|CAB40039.1|
   gi|3269282|emb|CAA19715|
   gi|3600044
   gi|4539447|emb|CAB40035.1|
   gi|3513747
   gi|2194136
   gi|3924609
   gi|2245044|emb|CAB10462|
   gi|391657|dbj|BAA01703|
   gi|479178|pir||S32437
   gi|531389
   gi|3935164
   gi|2865424
   gi|224534|prf||1107279B
   gi|74599|pir||OFFFCP
   gi|1169016|sp|P04146|COPI_DROME
   gi|950319
   gi|2865431
   gi|2865427
   gi|4239843|dbj|BAA74713.1|
   gi|4234854
   gi|4234852
   gi|2443320|dbj|BAA22288|
   gi|2213582
   gi|3779026
   gi|2245104|emb|CAB10526|
   gi|3779021
   gi|99719|pir||S23319
   gi|2244959|emb|CAB10380|
   gi|2865437
   gi|2244802|emb|CAB10225.1|
   gi|1916937
   gi|4325355|gb|AAD17352|
   gi|4309765|gb|AAD15534|
   gi|3377856
   gi|4539373|emb|CAB40067.1|
   gi|3695393
   gi|4377464|emb|CAA26447|
   gi|2865202
   gi|3269281|emb|CAA19714|
   gi|4063762
   gi|1769897|emb|CAA69271|
   gi|3650035
   gi|99755|pir||S23312
   gi|4263654|gb|AAD15376|
   gi|2462935|emb|CAA72989|
   gi|4249381|gb|AAD14478|
   gi|4185312
   gi|345511|pir||PC1232
   gi|553073
   gi|283051|pir||S27768
   gi|3021268|emb|CAA18463|
   gi|4557067|gb|AAD22506.1|AC007045_6
   gi|4539662|gb|AAD22155.1|AF061282_8
   gi|4263653|gb|AAD15375|
   gi|2415368
   gi|4325360|gb|AAD17357|
   gi|421954|pir||S25786
   gi|99730|pir||S23315
   gi|4567266|gb|AAD23679.1|AC006841_7
   gi|3377848
   gi|4544415|gb|AAD22324.1|AC006955_10
   gi|421955|pir||S25787
   gi|4185311
   gi|2827718|emb|CAA16691|

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