information on F19F18
(85445..87037)
Direction: +
Frame: 2
ORF
85337..87037 (Met: 85445 85955 86102 86120 86186 86234 86264 86408 86501 86666 86951 86978)
VEPQVTLRKSVRVISKPSYLDDYVLLASIECERLLLMINEEPWDYNEAKELQEWKKACVE
EIASITKNHTWDLVDLPIGAKPIGLKWVFKLKRNSDGSVNKHKARLVAKGYVQRHGIDFD
EVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELKEVVYVSQPEGFVIGGSEDK
VYKLNKALYGLKQAPRAWNNKLNKILMELKFTKCSKEPSLYCRRDKDELLVVVVYVDDLL
VTGSNLQVILEFKEEMAKKFEMSDLGKLTYYLGIEVFQHEGGIMLKQERYANKILEETKM
DDCNAVQIPMDANLKLSKAQEEKNIDEKEYRRNIGCLRYLLHTRPDLSYCVGVLSRYMHE
PKESHGAALKQILRYLRGTQSFGLCFKRMNKTELVGFSDSSHNVDEDDGRSTTGHIFYLN
DCPITWCSQKQETVALSSCEAEFMAATEAAKQAVWLQELLEEIVGKTCKQVLILIDNKSA
IALTKNPVFHGRSKHIHKRYHFIRECVANEQVEVEHVPGTEQRADILTKALGRIKFKEMR
DLVGVQDMTKCSFKLKGENVGVSLKLT
GenBank annotation
None
BLASTX cluster
82913..87034 cluster 9 89 hits for protein gene
BLASTN cluster
None
GENSCAN
85445..87037 gene model 23
Grail
84557..85336 exon Phase: 0 Score: 78
85445..86457 exon Phase: 0 Score: 59
86514..87040 exon Phase: 1 Score: 80
Exon-Intron boundary candidatates
Acceptor |
85341 [0.007] (1) |
85458 [0.002] (1) |
85755 [0.038] (1) |
85848 [0.005] (1) |
85860 [0.007] (1) |
86008 [0.002] (2) |
86154 [0.073] (1) |
86163 [0.004] (1) |
86178 [0.139] (1) |
86258 [0.020] (0) |
86401 [0.77N/0.003] (2) |
86404 [0.86N/0.078] (2) |
86514 [0.020] (1) |
86523 [0.005] (1) |
86530 [0.009] (2) |
86539 [0.094] (2) |
86658 [0.004] (1) |
86679 [0.004] (1) |
86871 [0.001] (1) |
86992 [0.003] (2) |
Donor |
85366 [0.034] (0) |
85506 [0.006] (2) |
85664 [0.004] (1) |
85682 [0.004] (1) |
86153 [0.013] (1) |
86202 [0.524] (2) |
86457 [0.830] (2) |
86567 [0.034] (1) |
86576 [0.014] (1) |
86695 [0.009] (0) |
86738 [0.153] (1) |
86832 [0.074] (2) |
87019 [0.062] (0) |
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Entrance