information on F19F18
(84359..86971)
Direction: +
Frame: 2
ORF
82826..87037 (Met: 82913 82982 83021 83027 83096 83243 83267 83672 83801 83804 83840 83912 84134 84224 84326 84329 84380 84557 84794 84800 84824 85034 85190 85426 85955 86102 86120 86186 86234 86264 86408 86501 86666 86951 86978 84512 84517 84534 85334 85429 85446)
FKHLYDQTKAINEVSVDSVRRKKVTCEEDMGDIVPVTNNTKEGSSSSSIQCPMLTATNYT
FWTIRMTMALKVHKVWETIEEGLDDIDKNNMASALLLQSIPEALTLRVGKLKTAKKIWDA
IKARNLGADRVKDARLQTLMGEFERIKMKETEKIDDFAGRLSELSTKSADLGNDIEEPKL
VKKFLNSLPRKRYIHIIAALEQVLDLNTTSFEDIVGRLKAYEERICDEEDNQDDQGKLLY
ANSEEKSAQNNWNPNKGKSQGGRGYGRGRGRDRFGNAQGNRDMTNVICYRCDKLGHYASD
CPDRLLKLQETQDVKNDDTQKADALMMHEVVFLNEKNVMPNKLEASLDVDNVWYLDNGAS
NHMTGNLAYFGEIDERVTGKVRFGDDSRIDIKGKGSITFIAKNEERKILADVYYIPDLRS
NIVSLGQATESGCDVRMRDDHLTLYDRDGKLLIKATRSRNRLYKVIMEVDDTKCLQLESL
SETTKWHARLGHIGTDNLKRMMQKELVIGIPNIKVEKEMCGSCLLGKQARKPFPQATPYR
ATSILELLHGDLCGPITPSTVA**ISLS*DDYSRYMWSLLLKEKSEAFNKFKSFKACVEQ
ETGATIKTFRTDRGGEFVSQEFQAFCDASGIKRHLTAPYSPQQNGVVERRNRTLMEMTRS
ILKHMSVPNYLWGEAVRHSTYLINRVATRTLVDQTPYKVLKSKKPNVEHLRVFGCIGYAK
AEAVHLRKLDDRSRMLVHLGTEPGSKGYRLLDPTRRKVIVSRDVVFDEEKRWKWNNSEDE
INNVPGMFSLSFEEFGNNGIREEDDITEETEINDGENHDREAEIPTQAIETVEQ*RAASH
TKKIRESDLKTKLLRRLCFVGLNRM*GSYL*NEEPWDYNEAKELQEWKKACVEEIASITK
NHTWDLVDLPIGAKPIGLKWVFKLKRNSDGSVNKHKARLVAKGYVQRHGIDFDEVFAPVA
RIETVRLIIALAASNGWEIHHLDVKTAFLHGELKEVVYVSQPEGFVIGGSEDKVYKLNKA
LYGLKQAPRAWNNKLNKILMELKFTKCSKEPSLYCRRDKDELLVVVVYVDDLLVTGSNLQ
VILEFKEEMAKKFEMSDLGKLTYYLGIEVFQHEGGIMLKQERYANKILEETKMDDCNAVQ
IPMDANLKLSKAQEEKNIDEKEYRRNIGCLRYLLHTRPDLSYCVGVLSRYMHEPKESHGA
ALKQILRYLRGTQSFGLCFKRMNKTELVGFSDSSHNVDEDDGRSTTGHIFYLNDCPITWC
SQKQETVALSSCEAEFMAATEAAKQAVWLQELLEEIVGKTCKQVLILIDNKSAIALTKNP
VFHGRSKHIHKRYHFIRECVANEQVEVEHVPGTEQRADILTKALGRIKFKEMRDLVGVQD
MTKCSFKLKGENVGVSLKLT
GenBank annotation
None
BLASTX cluster
82913..87034 cluster 9 89 hits for protein gene
BLASTN cluster
None
GENSCAN
82913..85333 gene model 22
85445..87037 gene model 23
Grail
83027..84514 exon Phase: 0 Score: 99
84557..85336 exon Phase: 0 Score: 78
85445..86457 exon Phase: 0 Score: 59
86514..87040 exon Phase: 1 Score: 80
Exon-Intron boundary candidatates
| Acceptor |
| 82895 [0.001] (0) |
83205 [0.001] (1) |
83215 [0.008] (2) |
83455 [0.003] (2) |
| 83469 [0.038] (1) |
83476 [0.029] (2) |
83483 [0.002] (0) |
83531 [0.002] (0) |
| 83595 [0.001] (1) |
83607 [0.002] (1) |
83695 [0.039] (2) |
84027 [0.003] (1) |
| 84107 [0.130] (0) |
84166 [0.001] (2) |
84578 [0.008] (0) |
84584 [0.002] (0) |
| 84617 [0.017] (0) |
84670 [0.003] (2) |
84730 [0.025] (2) |
84886 [0.147] (2) |
| 84891 [0.001] (1) |
84909 [0.002] (1) |
84996 [0.013] (1) |
85020 [0.002] (1) |
| 85050 [0.001] (1) |
85086 [0.006] (1) |
85117 [0.010] (2) |
85188 [0.046] (1) |
| 85212 [0.014] (1) |
85254 [0.011] (1) |
85320 [0.001] (1) |
85341 [0.007] (1) |
| 85458 [0.002] (1) |
85755 [0.038] (1) |
85848 [0.005] (1) |
85860 [0.007] (1) |
| 86008 [0.002] (2) |
86154 [0.073] (1) |
86163 [0.004] (1) |
86178 [0.139] (1) |
| 86258 [0.020] (0) |
86401 [0.77N/0.003] (2) |
86404 [0.86N/0.078] (2) |
86514 [0.020] (1) |
| 86523 [0.005] (1) |
86530 [0.009] (2) |
86539 [0.094] (2) |
86658 [0.004] (1) |
| 86679 [0.004] (1) |
86871 [0.001] (1) |
86992 [0.003] (2) |
| Donor |
| 82894 [0.654] (0) |
82952 [0.175] (1) |
82976 [0.004] (1) |
83047 [0.531] (0) |
| 83541 [0.005] (2) |
83562 [0.007] (2) |
83643 [0.009] (2) |
83680 [0.014] (0) |
| 83694 [0.041] (2) |
83836 [0.011] (0) |
83936 [0.019] (1) |
83965 [0.829] (0) |
| 84127 [0.004] (0) |
84217 [0.066] (0) |
84401 [0.088] (1) |
84519 [1.00N/0.841] (2) |
| 84789 [0.004] (2) |
84856 [0.011] (0) |
84935 [0.103] (1) |
85102 [0.100] (0) |
| 85143 [0.008] (2) |
85366 [0.034] (0) |
85506 [0.006] (2) |
85664 [0.004] (1) |
| 85682 [0.004] (1) |
86153 [0.013] (1) |
86202 [0.524] (2) |
86457 [0.830] (2) |
| 86567 [0.034] (1) |
86576 [0.014] (1) |
86695 [0.009] (0) |
86738 [0.153] (1) |
| 86832 [0.074] (2) |
87019 [0.062] (0) |
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