BLASTX alignment cluster 3    (23976..25822)

Local alignments in this cluster

gi|1172635|sp|P46466|PRS4_ORYSA[fasta] 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG (TAT-BINDING PROTEIN HOMOLOG 2)
gi|556558|dbj|BAA04615| (D17789) rice homologue of Tat binding protein [Oryza sativa]
Length 448 aa
position (link: detail on the area) subject position direction score
24033..24461 (25..167) + 154
24558..24788 (169..245) + 385
25057..25275 (230..302) + 274
25353..25628 (302..393) + 377
25661..25804 (375..422) + 231
25904..25990 (420..448) + 68

gi|1346810|sp|P48601|PRS4_DROME[fasta] 26S PROTEASE REGULATORY SUBUNIT 4 (P26S4)
gi|1066065 (U39303) P26s4 [Drosophila melanogaster]
Length 439 aa
position (link: detail on the area) subject position direction score
24078..24452 (31..155) + 231
24558..24788 (160..236) + 332
25057..25275 (221..293) + 256
25353..25574 (293..366) + 341
25661..25804 (366..413) + 203
25904..25990 (411..439) + 55

gi|345717|pir||A44468[fasta] probable ATP-dependent proteinase (EC 3.4.21.-) chain 4 - human
Length 440 aa
position (link: detail on the area) subject position direction score
24078..24452 (32..156) + 256
24558..24788 (161..237) + 333
25057..25275 (222..294) + 255
25353..25574 (294..367) + 344
25661..25804 (367..414) + 193

gi|1172634|sp|Q03527|PRS4_HUMAN[fasta] 26S PROTEASE REGULATORY SUBUNIT 4 (P26S4)
gi|403456 (L02426) 26S protease (S4) regulatory subunit [Homo sapiens]
gi|4506207|ref|NP_002793.1|pPSMC1| proteasome (prosome, macropain) 26S subunit, ATPase, 1
Length 440 aa
position (link: detail on the area) subject position direction score
24078..25275 (32..294) + 255
24078..25275 (32..294) + 255
24558..24788 (161..237) + 333
25353..25574 (294..367) + 344
25661..25804 (367..414) + 193

gi|1346811|sp|P49014|PRS4_MOUSE[fasta] 26S PROTEASE REGULATORY SUBUNIT 4 (P26S4)
gi|1066067 (U39302) P26s4 [Mus musculus]
gi|1395182|dbj|BAA09341| (D50696) proteasomal ATPase (S4) [Rattus norvegicus]
Length 440 aa
position (link: detail on the area) subject position direction score
24078..25275 (32..294) + 255
24078..25275 (32..294) + 255
24558..24788 (161..237) + 333
25353..25574 (294..367) + 344
25661..25804 (367..414) + 193

show all (91) hits

   gi|3122624|sp|O16368|PRS4_CAEEL
   gi|2492516|sp|Q90732|PRS4_CHICK
   gi|547935|sp|P36612|PRS4_SCHPO
   gi|730904|sp|P40327|PRS4_YEAST
   gi|557599
   gi|807211|bbs|160278
   gi|2492505|sp|Q58556|YB56_METJA
   gi|1825624
   gi|1172636|sp|P46502|PRS6_CAEEL
   gi|1168858|sp|P46464|CDCH_HALSA
   gi|3257095|dbj|BAA29778|
   gi|2648442
   gi|1172638|sp|P46507|PRS6_MANSE
   gi|2492517|sp|Q63570|PRS6_RAT
   gi|1172637|sp|P43686|PRS6_HUMAN
   gi|263099|bbs|121996
   gi|2791680
   gi|3450955
   gi|3122632|sp|O28303|PRS1_ARCFU
   gi|2622767
   gi|464860|sp|P34123|PRS6_DICDI
   gi|1709797|sp|P54775|PRS6_MOUSE
   gi|1709798|sp|P54778|PRS6_SOLTU
   gi|2492524|sp|Q58576|PRS1_METJA
   gi|2649281
   gi|3122631|sp|O26824|PRS1_METTH
   gi|3687465|emb|CAA21189|
   gi|730715|sp|Q07590|SAV_SULAC
   gi|3024439|sp|P78578|PRS6_ASPNG
   gi|464861|sp|P33298|PRS6_YEAST
   gi|2133217|pir||S69678
   gi|4105619
   gi|4574740|gb|AAD24194.1|AF134402_1
   gi|2492521|sp|Q25544|PRS8_NAEFO
   gi|2492523|sp|Q63569|PRSA_RAT
   gi|3510277|dbj|BAA32559|
   gi|3122626|sp|O18413|PRS8_DROME
   gi|1709799|sp|P54814|PRS8_MANSE
   gi|1709801|sp|Q01939|PRS8_YEAST
   gi|1710984
   gi|2815905
   gi|228885|prf||1813279A
   gi|1195528|bbs|172814
   gi|3979998|emb|CAB11558|
   gi|3122633|sp|O42586|PRSB_XENLA
   gi|3024431|sp|O04019|PRSA_ARATH
   gi|1346812|sp|P47210|PRS8_HUMAN
   gi|1174613|sp|P46465|PRSA_ORYSA
   gi|1174612|sp|P17980|PRSA_HUMAN
   gi|464863|sp|P34124|PRS8_DICDI
   gi|3024434|sp|O23894|PRSA_BRACM
   gi|1729860|sp|P54776|PRSA_LYCES
   gi|107855|pir||A34832
   gi|2564007|dbj|BAA22935|
   gi|3790757
   gi|1262435|emb|CAA61864|
   gi|1709800|sp|P52915|PRS8_MOUSE
   gi|2960216|emb|CAA11285|
   gi|3122625|sp|O17071|PRSX_CAEEL
   gi|2661071
   gi|2136322|pir||S60343
   gi|1078797|pir||S51042
   gi|263098|bbs|121995
   gi|1170767|sp|P41836|PRS8_SCHPO
   gi|3041724|sp|P46470|PRS8_XENLA
   gi|1709804|sp|P49719|PRSX_SPETR
   gi|2492522|sp|Q92524|PRSX_HUMAN
   gi|3914449|sp|O64982|PRS7_PRUPE
   gi|2492519|sp|Q41365|PRS7_SPIOL
   gi|3193161
   gi|547930|sp|P35998|PRS7_HUMAN
   gi|1172640|sp|P46472|PRS7_XENLA
   gi|464859|sp|P33297|PRSA_YEAST
   gi|3024433|sp|O14126|PRSA_SCHPO
   gi|2506090|sp|P53549|SUG2_YEAST
   gi|2492518|sp|Q63347|PRS7_RAT
   gi|2492520|sp|Q18787|PRS7_CAEEL
   gi|2506089|sp|P46471|PRS7_MOUSE
   gi|1147800
   gi|1916752
   gi|3122634|sp|O42587|PRSA_XENLA
   gi|464862|sp|P33299|PRS7_YEAST
   gi|543291|pir||S39349
   gi|2853099|emb|CAA16915|
   gi|1066063
   gi|3135751|emb|CAA06853|

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