HUGE

Gene/Protein Characteristic Table for KIAA1832

Link to : GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :
Accession No. :	AB058735
Description :	spire homolog 2.
HUGO Gene Name :	spire homolog 2 (Drosophila) (SPIRE2)
Clone Name :	fg02852 [Vector Info]
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 5515 bp
Physical map
Restriction map
The cloned DNA sequence was revised by direct RT-PCR/sequencing experiments following the alert of coding interruption by GeneMark analysis.
Comparison between the cloned and the revised DNA sequences.
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. revised DNA seq.
Warning for N-terminal truncation:
NO NO

Warning for coding interruption:
YES NO
Ensembl ContigView (Add our DAS server as a DAS source)
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Features of the protein sequence	Description

Length: 694 aa
This protein sequence is predicted from the revised DNA sequence

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
NP_115827	96.9	spire homolog 2...	Homo sapiens
Q8WWL2	96.9	Protein spire h...	Homo sapiens
CAD19439	96.9	Spir-2 protein ...	Homo sapiens
CAD39070	96.8	hypothetical pr...	Homo sapiens
AAI39733	99.3	SPIRE2 protein ...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB032961	1e-57	42.2	KIAA1135

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMSmart IPR011019 22 183 SM00750 KIND

ProfileScan IPR003124 228 242 PS51082 Actin-binding WH2

IPR003124 258 276 PS51082 Actin-binding WH2

IPR003124 322 339 PS51082 Actin-binding WH2

ScanRegExp IPR006058 571 579 PS00197 2Fe-2S ferredoxin

Search method	interpro_ID	From	To	Entry	Definition
HMMSmart	IPR011019	22	183	SM00750	KIND
ProfileScan	IPR003124	228	242	PS51082	Actin-binding WH2
IPR003124	258	276	PS51082	Actin-binding WH2
IPR003124	322	339	PS51082	Actin-binding WH2
ScanRegExp	IPR006058	571	579	PS00197	2Fe-2S ferredoxin

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
:

Primer_r
:

PCR conditions
: °C sec °C sec cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 16

Experimental conditions

Panel name	: unigene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.	revised DNA seq.
Warning for N-terminal truncation:	NO	NO
Warning for coding interruption:	YES	NO

Primer_f	:
Primer_r	:
PCR conditions	: °C sec °C sec cycles

Gene/Protein Characteristic Table for KIAA1832

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information