HUGE

Gene/Protein Characteristic Table for KIAA1731

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05706
Accession No. :	AB051518
Description :
HUGO Gene Name :
Clone Name :	bf02656 [Vector Info]
Source :	Human adult brain
Note :	We replaced ph00175, former representative clones for KIAA1731 with bf02656. (2002/5/10)

Features of the cloned DNA sequence	Description

Length: 7981 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
YES

Integrity of 3' end

Length of 3'UTR 1810 bp

Genome contig ID gi51511727f_92934525
PolyA signal sequence
(AATAAA,-19)
+----*----+----*----+----*----+----
AAAATTATTTAAAGTCAATAAATTGTTATTCGAGG
Flanking genome sequence
(168647 - 168696)
----+----*----+----*----+----*----+----*----+----*
AATTCCATGTTGTGATTTCTTCCACTGTCCATCAAGGTCACTTTAGATCC

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 11 f 93034525 93103170 30 99.9 Perfect prediction

Features of the protein sequence	Description

Length: 2056 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
EAW66909	0	99.9	hCG2036584, iso...	Homo sapiens
EAW66908	0	99.9	hCG2036584, iso...	Homo sapiens
NP_203753	0	99.8	hypothetical pr...	Homo sapiens
EAW66907	0	99.2	hCG2036584, iso...	Homo sapiens
XP_343352	3.6e-183	60.6	hypothetical pr...	Rattus norvegicus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: AAGCAAAGTGGTGAGCATCTG

Primer_r
: TCGGCTTATTGAGACTCGCAG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 11

Experimental conditions

Panel name	: unigene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	YES

Length of 3'UTR	1810 bp
Genome contig ID	gi51511727f_92934525
PolyA signal sequence (AATAAA,-19)	+--------+--------+----*----+---- AAAATTATTTAAAGTCAATAAATTGTTATTCGAGG
Flanking genome sequence (168647 - 168696)	----+--------+--------+--------+--------+----* AATTCCATGTTGTGATTTCTTCCACTGTCCATCAAGGTCACTTTAGATCC

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	11	f	93034525	93103170	30	99.9	Perfect prediction

Primer_f	: AAGCAAAGTGGTGAGCATCTG
Primer_r	: TCGGCTTATTGAGACTCGCAG
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1731

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information