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Gene/Protein Characteristic Table for KIAA0901

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Product ID	ORK01133
Accession No	AB020708
Description	histone deacetylase 6
Clone name	hk09716
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4078 bp) Predicted protein sequence (1233 aa)
HaloTag ORF Clone	FHC01133
Flexi ORF Clone	FXC01133
Source	Human adult brain

Length: 4078 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis). Integrity of 3' end

Length: 1233 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000286	625	648	PR01270	Histone deacetylase superfamily
	IPR000286	660	675	PR01270	Histone deacetylase superfamily
	IPR000286	750	760	PR01270	Histone deacetylase superfamily
HMMPfam	IPR000286	103	422	PF00850	Histone deacetylase superfamily
	IPR000286	498	818	PF00850	Histone deacetylase superfamily
	IPR001607	1151	1222	PF02148	Zinc finger
HMMSmart	IPR001607	1150	1199	SM00290	Zinc finger
ProfileScan	IPR001607	1149	1210	PS50271	Zinc finger

RT-PCR-ELISA

Experimental conditions

Chromosome No. X
Experimental conditions

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