Gene/Protein Characteristic Table for KIAA1740
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Product ID ORK04525
Accession No AB051527
Description cat eye syndrome chromosome region, candidate 2
Clone name pj00674
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3837 bp)
Predicted protein sequence (1119 aa)
Source Human brain (hippocampus)
Rouge ID mKIAA1740 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3837 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 475 bp
Genome contig ID gi89161203f_16283223
PolyA signal sequence
Flanking genome sequence
(129794 - 129843)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 22 f 16383223 16413015 11 100.0 Perfect prediction
Features of the protein sequence

Length: 1119 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAH56212 0 99.7 hypothetical pr...
Homo sapiens
EAW57756 0 99.9 hCG21538, isofo...
Homo sapiens
EAW57755 0 97.9 hCG21538, isofo...
Homo sapiens
Q9BXF3 0 98.2 Cat eye syndrom...
Homo sapiens
EAW57757 0 99.8 hCG21538, isofo...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001487 89 102 PR00503 Bromodomain
IPR001487 103 119 PR00503 Bromodomain
IPR001487 119 137 PR00503 Bromodomain
IPR001487 137 156 PR00503 Bromodomain
HMMPfam IPR001487 75 161 PF00439 Bromodomain
HMMSmart IPR001487 71 175 SM00297 Bromodomain
ProfileScan IPR001487 86 156 PS50014 Bromodomain
ScanRegExp IPR001487 91 148 PS00633 Bromodomain
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 22
Experimental conditions
Panel name genbank
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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