Gene/Protein Characteristic Table for KIAA1649
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Product ID ORK00261
Accession No AB055760
Description polymerase (DNA-directed), delta interacting protein 3, transcript variant 1
Clone name fk12339
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3345 bp)
Predicted protein sequence (424 aa)
Flexi ORF Clone FXC00261
Source Human fetal brain
Rouge ID mKIAA1649 by Kazusa Mouse cDNA Project
Note We replaced hh04042, former representative clones for KIAA1649 with fk12339. (2003/8/28)
Features of the cloned cDNA sequence

Length: 3345 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2069 bp
Genome contig ID gi89161203r_41209672
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 22 r 41309672 41340817 9 100.0 Perfect prediction
Features of the protein sequence

Length: 424 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW73266 1.2e-161 100.0 polymerase (DNA...
Homo sapiens
Q9BY77 1.4e-160 100.0 Polymerase delt...
Homo sapiens
XP_001103556 7.2e-160 98.6 similar to DNA ...
Macaca mulatta
AAH01488 5e-159 100.0 POLDIP3 protein...
Homo sapiens
AAI34442 8.4e-153 94.8 Polymerase (DNA...
Bos taurus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000504 285 349 PF00076 RNA recognition motif
HMMSmart IPR000504 284 350 SM00360 RNA recognition motif
ProfileScan IPR000504 283 354 PS50102 RNA recognition motif
Expression profile

Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 22
Experimental conditions
Panel name genbank
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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