# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fk12339.fasta.nr -Q ../query/KIAA1649.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1649, 424 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826391 sequences Expectation_n fit: rho(ln(x))= 5.7377+/-0.000192; mu= 8.5123+/- 0.011 mean_var=80.1332+/-15.861, 0's: 43 Z-trim: 44 B-trim: 1327 in 1/67 Lambda= 0.143274 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119593672|gb|EAW73266.1| polymerase (DNA-direct ( 482) 2737 575.1 1.2e-161 gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN RecName: Full= ( 421) 2719 571.4 1.4e-160 gi|109094475|ref|XP_001103556.1| PREDICTED: simila ( 541) 2709 569.4 7.2e-160 gi|33876281|gb|AAH01488.2| POLDIP3 protein [Homo s ( 417) 2694 566.2 5e-159 gi|157279209|gb|AAI34442.1| Polymerase (DNA-direct ( 421) 2594 545.5 8.4e-153 gi|73969375|ref|XP_531709.2| PREDICTED: similar to ( 515) 2578 542.3 9.8e-152 gi|74195617|dbj|BAE39617.1| unnamed protein produc ( 429) 2515 529.2 7e-148 gi|148672533|gb|EDL04480.1| polymerase (DNA-direct ( 420) 2513 528.8 9.2e-148 gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE RecName: Full= ( 420) 2508 527.8 1.9e-147 gi|74209870|dbj|BAE30916.1| unnamed protein produc ( 420) 2497 525.5 9.1e-147 gi|149065765|gb|EDM15638.1| polymerase (DNA-direct ( 420) 2486 523.2 4.4e-146 gi|149743380|ref|XP_001500767.1| PREDICTED: simila ( 443) 2428 511.2 1.9e-142 gi|60098375|emb|CAH65018.1| hypothetical protein [ ( 418) 2084 440.1 4.5e-121 gi|126339059|ref|XP_001370917.1| PREDICTED: hypoth ( 411) 2029 428.7 1.2e-117 gi|194382604|dbj|BAG64472.1| unnamed protein produ ( 438) 1871 396.1 8.4e-108 gi|149457707|ref|XP_001508801.1| PREDICTED: hypoth ( 399) 1832 388.0 2.1e-105 gi|52545639|emb|CAH56378.1| hypothetical protein [ ( 285) 1766 374.3 2e-101 gi|7228286|emb|CAB77059.1| hypothetical protein [H ( 392) 1633 346.9 4.9e-93 gi|119593670|gb|EAW73264.1| polymerase (DNA-direct ( 453) 1633 346.9 5.6e-93 gi|148672534|gb|EDL04481.1| polymerase (DNA-direct ( 391) 1509 321.2 2.6e-85 gi|74213780|dbj|BAE29328.1| unnamed protein produc ( 391) 1504 320.2 5.2e-85 gi|149065766|gb|EDM15639.1| polymerase (DNA-direct ( 391) 1478 314.8 2.2e-83 gi|49115681|gb|AAH73024.1| MGC82630 protein [Xenop ( 405) 1435 306.0 1.1e-80 gi|119593673|gb|EAW73267.1| polymerase (DNA-direct ( 279) 1399 298.4 1.4e-78 gi|194387136|dbj|BAG59934.1| unnamed protein produ ( 186) 1218 260.9 1.8e-67 gi|89267426|emb|CAJ83463.1| polymerase (DNA-direct ( 433) 1157 248.5 2.2e-63 gi|62471556|gb|AAH93543.1| MGC114944 protein [Xeno ( 395) 1120 240.8 4.1e-61 gi|49250533|gb|AAH74542.1| Polymerase (DNA-directe ( 367) 1099 236.5 7.9e-60 gi|114432134|gb|ABI74675.1| POLDIP3 [Homo sapiens] ( 163) 1073 230.9 1.7e-58 gi|26342917|dbj|BAC35115.1| unnamed protein produc ( 181) 1051 226.4 4.3e-57 gi|119593671|gb|EAW73265.1| polymerase (DNA-direct ( 250) 963 208.3 1.7e-51 gi|194389360|dbj|BAG61641.1| unnamed protein produ ( 184) 961 207.8 1.7e-51 gi|40795881|gb|AAR91612.1| polymerase delta intera ( 185) 950 205.5 8.4e-51 gi|18043107|gb|AAH19643.1| POLDIP3 protein [Homo s ( 229) 945 204.5 2e-50 gi|187468750|emb|CAQ51826.1| polymerase (DNA-direc ( 202) 867 188.4 1.3e-45 gi|47217029|emb|CAG01657.1| unnamed protein produc ( 466) 733 160.9 5.7e-37 gi|198424161|ref|XP_002119758.1| PREDICTED: simila ( 428) 362 84.2 6.5e-14 gi|210086899|gb|EEA35298.1| hypothetical protein B ( 476) 352 82.1 3e-13 gi|72087247|ref|XP_787816.1| PREDICTED: hypothetic ( 413) 344 80.5 8.3e-13 gi|108875011|gb|EAT39236.1| hypothetical protein A ( 441) 301 71.6 4.1e-10 gi|156219553|gb|EDO40433.1| predicted protein [Nem ( 346) 291 69.5 1.4e-09 gi|108875012|gb|EAT39237.1| hypothetical protein A ( 402) 269 64.9 3.8e-08 gi|167874047|gb|EDS37430.1| conserved hypothetical ( 431) 266 64.3 6.1e-08 gi|157019727|gb|EAU77553.2| AGAP000924-PA [Anophel ( 390) 249 60.8 6.4e-07 gi|189241005|ref|XP_969371.2| PREDICTED: similar t ( 404) 247 60.4 8.8e-07 gi|33146678|dbj|BAC80073.1| putative RNA and expor ( 323) 244 59.7 1.1e-06 gi|221132363|ref|XP_002166508.1| PREDICTED: simila ( 273) 243 59.5 1.1e-06 gi|193591791|ref|XP_001951805.1| PREDICTED: simila ( 443) 245 60.0 1.3e-06 gi|222636721|gb|EEE66853.1| hypothetical protein O ( 194) 237 58.1 2e-06 gi|190588224|gb|EDV28266.1| hypothetical protein T ( 318) 235 57.9 4e-06 >>gi|119593672|gb|EAW73266.1| polymerase (DNA-directed), (482 aa) initn: 2737 init1: 2737 opt: 2737 Z-score: 3058.4 bits: 575.1 E(): 1.2e-161 Smith-Waterman score: 2737; 100.000% identity (100.000% similar) in 424 aa overlap (1-424:59-482) 10 20 30 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGV :::::::::::::::::::::::::::::: gi|119 VGPRTPEVVRRSLAAEGAGSRGLDCFRLARRSKMADISLDELIRKRGAAAKGRLNARPGV 30 40 50 60 70 80 40 50 60 70 80 90 KIAA16 GGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA16 KGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTK 150 160 170 180 190 200 160 170 180 190 200 210 KIAA16 TIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGF 210 220 230 240 250 260 220 230 240 250 260 270 KIAA16 LHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKEL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA16 PAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA 330 340 350 360 370 380 340 350 360 370 380 390 KIAA16 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSS 390 400 410 420 430 440 400 410 420 KIAA16 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL :::::::::::::::::::::::::::::::::: gi|119 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL 450 460 470 480 >>gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN RecName: Full=Poly (421 aa) initn: 2719 init1: 2719 opt: 2719 Z-score: 3039.2 bits: 571.4 E(): 1.4e-160 Smith-Waterman score: 2719; 100.000% identity (100.000% similar) in 421 aa overlap (4-424:1-421) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 MADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|504 KIKL 420 >>gi|109094475|ref|XP_001103556.1| PREDICTED: similar to (541 aa) initn: 2709 init1: 2709 opt: 2709 Z-score: 3026.4 bits: 569.4 E(): 7.2e-160 Smith-Waterman score: 2709; 98.585% identity (99.764% similar) in 424 aa overlap (1-424:118-541) 10 20 30 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGV ::::::::::::::::::.::::::::::: gi|109 ADVGSSSSLCSGRRGGLAGWGCLGSFRLARRSKMADISLDELIRKRGAVAKGRLNARPGV 90 100 110 120 130 140 40 50 60 70 80 90 KIAA16 GGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRI 150 160 170 180 190 200 100 110 120 130 140 150 KIAA16 KGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTK :::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::::: gi|109 KGKVQDAREMLNSRKQQTTAPQKPRQVTDAREKISLKRSSPAAFINPPIGTVTPALKLTK 210 220 230 240 250 260 160 170 180 190 200 210 KIAA16 TIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGF 270 280 290 300 310 320 220 230 240 250 260 270 KIAA16 LHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKEL :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|109 LHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSVRTKALTNMSRTLVNKEEPPKEL 330 340 350 360 370 380 280 290 300 310 320 330 KIAA16 PAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA 390 400 410 420 430 440 340 350 360 370 380 390 KIAA16 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSS :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|109 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSVKKESELPRRVNSASSS 450 460 470 480 490 500 400 410 420 KIAA16 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL :::::::::::::::::::::::::::::::::: gi|109 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL 510 520 530 540 >>gi|33876281|gb|AAH01488.2| POLDIP3 protein [Homo sapie (417 aa) initn: 2694 init1: 2694 opt: 2694 Z-score: 3011.3 bits: 566.2 E(): 5e-159 Smith-Waterman score: 2694; 100.000% identity (100.000% similar) in 417 aa overlap (8-424:1-417) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 SLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|338 KIKL >>gi|157279209|gb|AAI34442.1| Polymerase (DNA-directed), (421 aa) initn: 2594 init1: 2594 opt: 2594 Z-score: 2899.5 bits: 545.5 E(): 8.4e-153 Smith-Waterman score: 2594; 94.774% identity (98.337% similar) in 421 aa overlap (4-424:1-421) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR ::::::::::::::::.:::::::::::::::::::::.:::: .:::::::::::: gi|157 MADISLDELIRKRGAASKGRLNARPGVGGVRSRVGIQQSLLSQPARTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA :::::::::::::::::::::::::::::::::::::::::::::::.::::::.::::: gi|157 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQSTVPQKPHQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA ::::::::.:::::..::::::::::::::::::::::::::.: ::::::::::::::: gi|157 REKISLKRNSPAAFMSPPIGTVTPALKLTKTIQVPQQKAMAPIHAHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT ::::::::.::: :: .:::::::::::.:::::::.::::::::::::::::::::::: gi|157 KQNLYDLDDDDDVIAPIPTKQMKFAASGSFLHHMAGVSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV :::: ::.::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|157 APALSSSVRTKALTNMSRTLVNKEEPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::.::::::::::::: :::::::::::::::::::::::::::::::: gi|157 DQPILLRLSDSPSVKKESELPRRVNSAPSSNPPAEVDPDTILKALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|157 KIKL 420 >>gi|73969375|ref|XP_531709.2| PREDICTED: similar to DNA (515 aa) initn: 2578 init1: 2578 opt: 2578 Z-score: 2880.4 bits: 542.3 E(): 9.8e-152 Smith-Waterman score: 2578; 93.160% identity (98.349% similar) in 424 aa overlap (1-424:92-515) 10 20 30 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGV : :::::::::::::::::.:::::::::: gi|739 PDAGSGSLLRSGRRGGLQGWGSLSCSRFARRRKMADISLDELIRKRGAATKGRLNARPGV 70 80 90 100 110 120 40 50 60 70 80 90 KIAA16 GGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRI ::::::::::::::.: .::::::::::::::::::::::::::.::::::::::::::: gi|739 GGVRSRVGIQQGLLGQPARTATFQQRFDARQKIGLSDARLKLGVQDAREKLLQKDARFRI 130 140 150 160 170 180 100 110 120 130 140 150 KIAA16 KGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTK :::::::::::::::::.::::::::::::::::::::::::.:..:::::::::::::: gi|739 KGKVQDAREMLNSRKQQVTVPQKPRQVADAREKISLKRSSPATFLSPPIGTVTPALKLTK 190 200 210 220 230 240 160 170 180 190 200 210 KIAA16 TIQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGF :::::::::::::: ::::::::::::: ::::::::.::::..: .:.::::::::..: gi|739 TIQVPQQKAMAPLHTHPAGMRINVVNNHPAKQNLYDLEEDDDSVAPIPSKQMKFAASSSF 250 260 270 280 290 300 220 230 240 250 260 270 KIAA16 LHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKEL :::.:::::::.:::::::::::::::::::::::::.::::::.:::::::::: :::: gi|739 LHHVAGLSSSKFSMSKALPLTKVVQNDAYTAPALPSSVRTKALTSMSRTLVNKEESPKEL 310 320 330 340 350 360 280 290 300 310 320 330 KIAA16 PAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PPAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDA 370 380 390 400 410 420 340 350 360 370 380 390 KIAA16 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSS :::::::::::::::::::::::::::::::::::::::::::.::::::::::::..:: gi|739 ITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSVKKESELPRRVNSTASS 430 440 450 460 470 480 400 410 420 KIAA16 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL :::::::::::::::::::::::::::::::::: gi|739 NPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL 490 500 510 >>gi|74195617|dbj|BAE39617.1| unnamed protein product [M (429 aa) initn: 2425 init1: 2319 opt: 2515 Z-score: 2811.2 bits: 529.2 E(): 7e-148 Smith-Waterman score: 2515; 90.802% identity (96.934% similar) in 424 aa overlap (1-424:7-429) 10 20 30 40 50 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQ : ::.:.::::::::::.::::::..:::.::::::::::..:..: .:::::: gi|741 VSPLAARRKMTDLSLDELIRKRGTAAKGRLSVRPGIGGVRSRVGIQHSLVNQPARTATFQ 10 20 30 40 50 60 60 70 80 90 100 110 KIAA16 QRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKP ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|741 QRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQGTVPQKP 70 80 90 100 110 120 120 130 140 150 160 170 KIAA16 RQVADAREKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINV :::::::::::::: ::::: .::::::::::::::::::::::::.::: ::::::::: gi|741 RQVADAREKISLKRRSPAAFTSPPIGTVTPALKLTKTIQVPQQKAMVPLHAHPAGMRINV 130 140 150 160 170 180 180 190 200 210 220 230 KIAA16 VNNHQAKQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVV :::::::::::::::::: .. :: :::::::.:...:::.::::::::::::::::::: gi|741 VNNHQAKQNLYDLDEDDDIVVPVPPKQMKFAATGSLVHHMTGLSSSKLSMSKALPLTKVV 190 200 210 220 230 240 240 250 260 270 280 290 KIAA16 QNDAYTAPALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRV ::::::::.::::.::::::.:::::::::::::::: :::::::::::::::::::::: gi|741 QNDAYTAPVLPSSVRTKALTSMSRTLVNKEEPPKELPPAEPVLSPLEGTKMTVNNLHPRV 250 260 270 280 290 300 300 310 320 330 340 350 KIAA16 TEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMN 310 320 330 340 350 360 360 370 380 390 400 410 KIAA16 GNVITSDQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVT :::::::::::::::::::.::::::::: : ::: ::::::::::.:.::::::::::: gi|741 GNVITSDQPILLRLSDSPSVKKESELPRRGNPASS-NPPAEVDPDTVLRALFKSSGASVT 370 380 390 400 410 420 KIAA16 TQPTEFKIKL :::::::::: gi|741 TQPTEFKIKL 420 >>gi|148672533|gb|EDL04480.1| polymerase (DNA-directed), (420 aa) initn: 2429 init1: 2323 opt: 2513 Z-score: 2809.1 bits: 528.8 E(): 9.2e-148 Smith-Waterman score: 2513; 91.449% identity (97.150% similar) in 421 aa overlap (4-424:1-420) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR :::.::::::::::.::::::..:::.::::::::::..:..: .:::::::::::: gi|148 MADLSLDELIRKRGTAAKGRLSVRPGIGGVRSRVGIQHSLVNQPARTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|148 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQGTVPQKPRQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA :::::::: ::::: .::::::::::::::::::::::::.::: ::::::::::::::: gi|148 REKISLKRRSPAAFTSPPIGTVTPALKLTKTIQVPQQKAMVPLHAHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT :::::::::::: .: :: :::::::.:...:::.::::::::::::::::::::::::: gi|148 KQNLYDLDEDDDIVAPVPPKQMKFAATGSLVHHMTGLSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV ::.::::.::::::.:::::::::::::::: :::::::::::::::::::::::::::: gi|148 APVLPSSVRTKALTSMSRTLVNKEEPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::.::::::::: : ::: ::::::::::.:.::::::::::::::::: gi|148 DQPILLRLSDSPSVKKESELPRRGNPASS-NPPAEVDPDTVLRALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|148 KIKL 420 >>gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE RecName: Full=Poly (420 aa) initn: 2424 init1: 2318 opt: 2508 Z-score: 2803.5 bits: 527.8 E(): 1.9e-147 Smith-Waterman score: 2508; 91.211% identity (97.150% similar) in 421 aa overlap (4-424:1-420) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR :::.::::::::::.::::::..:::.::::::::::..:..: .:::::::::::: gi|504 MADLSLDELIRKRGTAAKGRLSVRPGIGGVRSRVGIQHSLVNQPARTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|504 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQGTVPQKPRQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA :::::::: ::::: .::::::::::::::::::::::::.::: ::::::::::::::: gi|504 REKISLKRRSPAAFTSPPIGTVTPALKLTKTIQVPQQKAMVPLHAHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT :::::::::::: .. :: :::::::.:...:::.::::::::::::::::::::::::: gi|504 KQNLYDLDEDDDIVVPVPPKQMKFAATGSLVHHMTGLSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV ::.::::.::::::.:::::::::::::::: :::::::::::::::::::::::::::: gi|504 APVLPSSVRTKALTSMSRTLVNKEEPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::.::::::::: : ::: ::::::::::.:.::::::::::::::::: gi|504 DQPILLRLSDSPSVKKESELPRRGNPASS-NPPAEVDPDTVLRALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|504 KIKL 420 >>gi|74209870|dbj|BAE30916.1| unnamed protein product [M (420 aa) initn: 2413 init1: 2307 opt: 2497 Z-score: 2791.2 bits: 525.5 E(): 9.1e-147 Smith-Waterman score: 2497; 90.974% identity (96.912% similar) in 421 aa overlap (4-424:1-420) 10 20 30 40 50 60 KIAA16 RSKMADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDAR :::.::::::::::.::::::..:::.::::::::::..:..: .:::::::::::: gi|742 MADLSLDELIRKRGTAAKGRLSVRPGIGGVRSRVGIQHSLVNQPARTATFQQRFDAR 10 20 30 40 50 70 80 90 100 110 120 KIAA16 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADA ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|742 QKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQGTVPQKPRQVADA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA16 REKISLKRSSPAAFINPPIGTVTPALKLTKTIQVPQQKAMAPLHPHPAGMRINVVNNHQA :::::::: ::::: .::::::::::::::::::::::::.::: ::::::::::::::: gi|742 REKISLKRRSPAAFTSPPIGTVTPALKLTKTIQVPQQKAMVPLHAHPAGMRINVVNNHQA 120 130 140 150 160 170 190 200 210 220 230 240 KIAA16 KQNLYDLDEDDDGIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYT :::::::::::: .. :: :::::::.:...:::. :::::::::::::::::::::::: gi|742 KQNLYDLDEDDDIVVPVPPKQMKFAATGSLVHHMTRLSSSKLSMSKALPLTKVVQNDAYT 180 190 200 210 220 230 250 260 270 280 290 300 KIAA16 APALPSSIRTKALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIV ::.::::.::::::.:::::::::::::::: :::::::::::::::::::::::::::: gi|742 APVLPSSVRTKALTSMSRTLVNKEEPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA16 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITS 300 310 320 330 340 350 370 380 390 400 410 420 KIAA16 DQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEF :::::::::::::.::::::::: : ::: ::::::::::.:.::::::::::::::::: gi|742 DQPILLRLSDSPSVKKESELPRRGNPASS-NPPAEVDPDTVLRALFKSSGASVTTQPTEF 360 370 380 390 400 410 KIAA16 KIKL :::: gi|742 KIKL 420 424 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 08:36:34 2009 done: Thu Mar 5 08:41:00 2009 Total Scan time: 1486.390 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]