hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08491775/chunk_1/iprscan-20080502-08491775.nocrc
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Query sequence: KIAA1649
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  52.4    5.7e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1     284   350 ..     1   121 []    52.4  5.7e-11

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 284 to 350: score 52.4, E = 5.7e-11
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +  V NL  +p vteed+ elF                +G ++++r+
    KIAA1649   284    KMTVNNL--HPRVTEEDIVELF--------------CVCGALKRARL 314  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   v+                             G a V F  ++dA  A   
    KIAA1649   315 VHP----------------------------GVAEVVFVKKDDAITA--Y 334  

                   ealnaskGkeledgGrptlglrVe<-*
                   +++n   ++ l  +G+p   ++++   
    KIAA1649   335 KKYN---NRCL--DGQP---MKCN    350  

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