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Order Kazusa clone(s) from : |
| Product ID | ORK00876 |
|---|---|
| Accession No | AB046829 |
| Description | TBC/LysM-associated domain containing 1 |
| Clone name | fj11503 |
| Vector information | |
| cDNA sequence | DNA sequence (4683 bp) Predicted protein sequence (473 aa) |
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HaloTag ORF Clone |
FHC00876
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| Flexi ORF Clone | FXC00876 |
| Source | Human fetal brain |
| Rouge ID |
mKIAA1609
by Kazusa Mouse cDNA Project
|
Length: 4683 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | Warning | No warning |
Ensembl ContigView (Add our DAS server as a DAS source)
| Chr | f/r | start | end | exon | identity | class | |
|---|---|---|---|---|---|---|---|
|
| 16 | r | 83067991 | 83095734 | 9 | 99.1 | Internal No-hit |
Length: 473 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR006571 | 285 | 429 | PF07534 | TLDc |
| HMMSmart | IPR006571 | 260 | 429 | SM00584 | TLDc |
Prediction of transmembrane (TM) segments| Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 219 | RVPHVAIFLSVVICKGFLVLCSS | 241 | PRIMARY | 23 |
|---|
RT-PCR-ELISA
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Experimental conditions| Primer_f | CTTTCCACCCTGAGCTTGTTC |
|---|---|
| Primer_r | TTGAGTGTCCAGAGGCAGAAC |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. 16
Experimental conditions| Panel name | unigene |
|---|---|
| Primer_f | - |
| Primer_r | - |
| PCR product length | - |
| PCR conditions | - |