hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07414750/chunk_1/iprscan-20080502-07414750.nocrc
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Query sequence: KIAA1609
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00584                                                 292.3    3.5e-83   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00584    1/1     260   429 ..     1   261 []   292.3  3.5e-83

Alignments of top-scoring domains:
SM00584: domain 1 of 1, from 260 to 429: score 292.3, E = 3.5e-83
                   *->ssiLseeilalinsllPtrqrgyepWtLLYsssqHGySlntlyrkve
                      +siL+++ +++in++lP++qr++  W+LL+ss+ HG+S+++l+++++
    KIAA1609   260    ESILDVLSVMYINAQLPREQRHR--WRLLFSSELHGHSFSQLCGHIT 304  

                   gygprsgrkPtllvIkdkakvanekSssdaisldAtidrdyssstirtdk
                   ++gp      ++ v++d                                 
    KIAA1609   305 HRGP------CVAVLED--------------------------------- 315  

                   avqadfGadfrtdgevfGayaSqawresdhrgkGkaFyGtgesaFLFqLn
                              +d++vfG++aS++w+++++      F+G++++ FLF+++
    KIAA1609   316 -----------HDKHVFGGFASCSWEVKPQ------FQGDNRC-FLFSIC 347  

                   ppngvePkfavydatgknknlamsdknddLHSahLatrgnyfyingtsds
                         P++avy +tg+n+                    +y+y+n+++++
    KIAA1609   348 ------PSMAVYTHTGYND--------------------HYMYLNHGQQT 371  

                   lpiGgGgGgqinyfgLwiDedlnhGrssnhasckTfgNepllsnvGfekd
                   +p+G+G+Ggq+nyfgLw+D d+++G+s+++++c+T+ N+p+ls     ++
    KIAA1609   372 IPNGLGMGGQHNYFGLWVDVDFGKGHSRAKPTCTTY-NSPQLS-----AQ 415  

                   edFlIldiEVWgfg<-*
                   e+F+++++EVW++g   
    KIAA1609   416 ENFQFDKMEVWAVG    429  

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