hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07414750/chunk_1/iprscan-20080502-07414750.nocrc
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Query sequence: KIAA1609
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07534.6.ls TLD                                            284.2    2.3e-82   1
PF07534.6.fs TLD                                            282.3    8.6e-82   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07534.6.fs   1/1     285   429 ..     1   165 []   282.3  8.6e-82
PF07534.6.ls   1/1     285   429 ..     1   165 []   284.2  2.3e-82

Alignments of top-scoring domains:
PF07534.6.fs: domain 1 of 1, from 285 to 429: score 282.3, E = 8.6e-82
                   *->LLYssskHGtSlntllrkvekeyddkgPtllvikdtDgqvFGayass
                      LL+ss+ HG+S+++l+++++    ++gP++ v++d+D +vFG++as+
    KIAA1609   285    LLFSSELHGHSFSQLCGHIT----HRGPCVAVLEDHDKHVFGGFASC 327  

                   swrespvKRnFyGtgDsesCFLFtlnkelPpkkfavyrwTGknDddksnn
                   sw+++p   +F+G++  ++ FLF+++   P  ++avy++TG+n     ++
    KIAA1609   328 SWEVKP---QFQGDN--RC-FLFSIC---P--SMAVYTHTGYN-----DH 361  

                   fiylntdqqtyPngLgiGGgsgrfgLwlDedlknGessp.esceTFnnpp
                   ++yln+ qqt+PngLg+GG++++fgLw+D d+++G+s+++++c+T+n+ p
    KIAA1609   362 YMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRAkPTCTTYNS-P 410  

                   LlskdedFkIqdiEvWgvg<-*
                   +ls++e F+++++EvW+vg   
    KIAA1609   411 QLSAQENFQFDKMEVWAVG    429  

PF07534.6.ls: domain 1 of 1, from 285 to 429: score 284.2, E = 2.3e-82
                   *->LLYssskHGtSlntllrkvekeyddkgPtllvikdtDgqvFGayass
                      LL+ss+ HG+S+++l+++++    ++gP++ v++d+D +vFG++as+
    KIAA1609   285    LLFSSELHGHSFSQLCGHIT----HRGPCVAVLEDHDKHVFGGFASC 327  

                   swrespvKRnFyGtgDsesCFLFtlnkelPpkkfavyrwTGknDddksnn
                   sw+++p   +F+G++  ++ FLF+++   P  ++avy++TG+n     ++
    KIAA1609   328 SWEVKP---QFQGDN--RC-FLFSIC---P--SMAVYTHTGYN-----DH 361  

                   fiylntdqqtyPngLgiGGgsgrfgLwlDedlknGessp.esceTFnnpp
                   ++yln+ qqt+PngLg+GG++++fgLw+D d+++G+s+++++c+T+n+ p
    KIAA1609   362 YMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRAkPTCTTYNS-P 410  

                   LlskdedFkIqdiEvWgvg<-*
                   +ls++e F+++++EvW+vg   
    KIAA1609   411 QLSAQENFQFDKMEVWAVG    429  

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