Gene/Protein Characteristic Table for KIAA1475
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Product ID ORK02035
Accession No AB040908
Description vacuolar protein sorting 18 homolog (S. cerevisiae)
Clone name fj03454
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3869 bp)
Predicted protein sequence (986 aa)
Flexi ORF Clone FXC02035
Source Human fetal brain
Rouge ID mKIAA1475 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3869 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 633 bp
Genome contig ID gi51511731f_38873945
PolyA signal sequence
Flanking genome sequence
(109521 - 109570)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 15 f 38973945 38983464 5 100.0 Perfect prediction
Features of the protein sequence

Length: 986 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9P253 0 100.0 Vacuolar protei...
Homo sapiens
XP_523187 0 99.7 vacuolar protei...
Pan troglodytes
XP_001099146 0 99.7 similar to vacu...
Macaca mulatta
XP_544627 0 97.4 similar to vacu...
Canis lupus fam...
XP_001503547 0 97.5 similar to LOC5...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR007810 304 449 PF05131 Pep3/Vps18/deep orange
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 15
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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