Gene/Protein Characteristic Table for KIAA1338
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Product ID ORK04865
Accession No AB037759
Description eukaryotic translation initiation factor 2 alpha kinase 4
Clone name fh16948
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4994 bp)
Predicted protein sequence (1495 aa)
Source Human fetal brain
Rouge ID mKIAA1338 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4994 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 506 bp
Genome contig ID gi51511731f_37935111
PolyA signal sequence
(AATAAA,-17)
+----*----+----*----+----*----+----
ATTTATCTTTTGGGATATAATAAATGCTTTCATAT
Flanking genome sequence
(179974 - 180023)
----+----*----+----*----+----*----+----*----+----*
ACCTGCTGCTTTTTAATTGTAAATCTATTAACACTAAAGGTTTTAGGGAG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 15 f 38033407 38115083 35 99.8 Terminal No-hit
Features of the protein sequence
Description

Length: 1495 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9P2K8 0 100.0 Eukaryotic tran...
Homo sapiens
XP_001140245 0 99.9 eukaryotic tran...
Pan troglodytes
AAI46320 0 99.9 Eukaryotic tran...
synthetic construct
XP_001501317 0 94.0 similar to Euka...
Equus caballus
XP_001139259 0 97.4 eukaryotic tran...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB037790 1.2e-05 33.9 KIAA1369
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR000719 196 295 PD000001 Protein kinase
IPR000719 436 506 PD000001 Protein kinase
IPR000719 642 838 PD000001 Protein kinase
HMMPfam IPR000719 178 289 PF00069 Protein kinase
IPR000719 436 847 PF00069 Protein kinase
IPR002314 909 1069 PF00587 Aminoacyl-tRNA synthetase
HMMSmart IPR002290 132 385 SM00220 Serine/threonine protein kinase
IPR001245 436 847 SM00219 Tyrosine protein kinase
IPR002290 436 847 SM00220 Serine/threonine protein kinase
ProfileScan IPR000719 142 385 PS50011 Protein kinase
IPR000719 436 847 PS50011 Protein kinase
ScanRegExp IPR000719 442 465 PS00107 Protein kinase
IPR006172 533 541 PS00116 DNA-directed DNA polymerase B
IPR008271 690 702 PS00108 Serine/threonine protein kinase
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TGAAAGGAATGGCAGAGAAGC
Primer_r GTCTGAAGTCGAGTTTGTACC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 15
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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