Gene/Protein Characteristic Table for KIAA1185
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Product ID ORK05878
Accession No AB033011
Description leucine rich repeat containing 47
Clone name hg02311a
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (2080 bp)
Predicted protein sequence (403 aa)
Source Human adult brain
Rouge ID mKIAA1185 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 2080 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 868 bp
Genome contig ID gi89161185r_3586644
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 1 r 3686644 3702360 7 99.5 Perfect prediction
Features of the protein sequence

Length: 403 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q8N1G4 4.3e-149 100.0 Leucine-rich re...
Homo sapiens
XP_001915393 1.6e-125 84.7 leucine rich re...
Equus caballus
EDL81252 5.5e-124 83.9 leucine rich re...
Rattus norvegicus
NP_001129138 5.7e-124 83.9 leucine rich re...
Rattus norvegicus
XP_546742 5.7e-124 81.9 similar to Y54E...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001611 24 37 PR00019 Leucine-rich repeat
IPR001611 44 57 PR00019 Leucine-rich repeat
HMMPfam IPR001611 23 44 PF00560 Leucine-rich repeat
IPR005146 258 325 PF03483 B3/4
HMMSmart IPR003591 21 44 SM00369 Leucine-rich repeat
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 1
Experimental conditions
Panel name GeneBridge 4
PCR product length 162 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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