# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg02311a.fasta.nr -Q ../query/KIAA1185.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1185, 403 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823864 sequences Expectation_n fit: rho(ln(x))= 5.2437+/-0.000188; mu= 11.0306+/- 0.011 mean_var=84.6591+/-16.244, 0's: 30 Z-trim: 48 B-trim: 204 in 1/65 Lambda= 0.139392 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74750895|sp|Q8N1G4.1|LRC47_HUMAN RecName: Full= ( 583) 2605 533.6 4.3e-149 gi|194208126|ref|XP_001915393.1| PREDICTED: leucin ( 518) 2215 455.1 1.6e-125 gi|149024755|gb|EDL81252.1| leucine rich repeat co ( 558) 2190 450.1 5.5e-124 gi|208609970|ref|NP_001129138.1| leucine rich repe ( 580) 2190 450.1 5.7e-124 gi|73956691|ref|XP_546742.2| PREDICTED: similar to ( 589) 2190 450.2 5.7e-124 gi|81908912|sp|Q505F5.1|LRC47_MOUSE RecName: Full= ( 581) 2171 446.3 8e-123 gi|148683005|gb|EDL14952.1| leucine rich repeat co ( 464) 2167 445.4 1.2e-122 gi|149253441|ref|XP_001475204.1| PREDICTED: simila ( 580) 2167 445.5 1.4e-122 gi|74191931|dbj|BAE32909.1| unnamed protein produc ( 581) 2163 444.7 2.5e-122 gi|151557045|gb|AAI50060.1| LRRC47 protein [Bos ta ( 581) 2099 431.8 1.8e-118 gi|126329506|ref|XP_001376729.1| PREDICTED: simila ( 581) 2009 413.7 5.2e-113 gi|171847334|gb|AAI61789.1| LOC100145802 protein [ ( 570) 1785 368.7 1.8e-99 gi|33416646|gb|AAH55992.1| MGC68895 protein [Xenop ( 566) 1722 356.0 1.2e-95 gi|159155895|gb|AAI54502.1| Si:ch211-147a11.7 prot ( 565) 1444 300.1 8.1e-79 gi|62531098|gb|AAH93410.1| Si:ch211-147a11.7 prote ( 448) 1442 299.6 9e-79 gi|169145669|emb|CAQ13962.1| novel protein [Danio ( 574) 1442 299.7 1.1e-78 gi|126631489|gb|AAI33857.1| Si:ch211-147a11.7 prot ( 541) 1441 299.5 1.2e-78 gi|118100978|ref|XP_417543.2| PREDICTED: similar t ( 575) 1420 295.3 2.3e-77 gi|47222796|emb|CAG01763.1| unnamed protein produc ( 553) 1375 286.2 1.2e-74 gi|12850904|dbj|BAB28889.1| unnamed protein produc ( 244) 1309 272.6 6.5e-71 gi|149492983|ref|XP_001513380.1| PREDICTED: simila ( 243) 1214 253.5 3.7e-65 gi|189522468|ref|XP_001336134.2| PREDICTED: simila ( 262) 966 203.7 4e-50 gi|210128002|gb|EEA75682.1| hypothetical protein B ( 535) 938 198.3 3.3e-48 gi|198427272|ref|XP_002131295.1| PREDICTED: simila ( 568) 887 188.1 4.2e-45 gi|115803082|ref|XP_780852.2| PREDICTED: hypotheti ( 471) 849 180.4 7.4e-43 gi|156545868|ref|XP_001606500.1| PREDICTED: hypoth ( 529) 843 179.2 1.9e-42 gi|215508938|gb|EEC18391.1| phenylalanyl-tRNA synt ( 540) 774 165.4 2.8e-38 gi|210090926|gb|EEA39190.1| hypothetical protein B ( 537) 662 142.8 1.7e-31 gi|110748945|ref|XP_394881.3| PREDICTED: similar t ( 490) 646 139.6 1.5e-30 gi|149538992|ref|XP_001513210.1| PREDICTED: simila ( 144) 633 136.5 3.7e-30 gi|221114089|ref|XP_002160928.1| PREDICTED: simila ( 511) 580 126.3 1.5e-26 gi|91084651|ref|XP_967087.1| PREDICTED: similar to ( 504) 549 120.1 1.1e-24 gi|7332076|gb|AAF60763.1| Hypothetical protein Y54 ( 507) 548 119.9 1.3e-24 gi|212510584|gb|EEB13734.1| phenylalanyl-tRNA synt ( 518) 542 118.7 3e-24 gi|190586903|gb|EDV26956.1| hypothetical protein T ( 526) 509 112.1 3.1e-22 gi|187036324|emb|CAP24930.1| Hypothetical protein ( 507) 506 111.4 4.5e-22 gi|167867483|gb|EDS30866.1| leucine-rich repeat-co ( 539) 484 107.0 1e-20 gi|167867655|gb|EDS31038.1| leucine-rich repeat-co ( 539) 478 105.8 2.3e-20 gi|108878196|gb|EAT42421.1| conserved hypothetical ( 533) 437 97.6 7.1e-18 gi|163774613|gb|EDQ88240.1| predicted protein [Mon ( 938) 341 78.5 6.9e-12 gi|220976074|gb|EED94402.1| phenylalanyl-trna synt ( 620) 317 73.5 1.5e-10 gi|160703419|gb|EAT80962.2| hypothetical protein S ( 614) 307 71.5 5.8e-10 gi|217407944|gb|EEC47879.1| predicted protein [Pha ( 640) 306 71.3 6.9e-10 gi|158591770|gb|EDP30373.1| Leucine Rich Repeat fa ( 439) 292 68.4 3.7e-09 gi|222453976|gb|ACM58241.1| phenylalanyl-tRNA synt ( 578) 281 66.2 2.1e-08 gi|156222713|gb|EDO43554.1| predicted protein [Nem ( 522) 278 65.6 2.9e-08 gi|121887047|gb|EAX92593.1| phenylalanyl-tRNA synt ( 581) 274 64.8 5.5e-08 gi|76154717|gb|AAX26146.2| SJCHGC05559 protein [Sc ( 277) 263 62.3 1.5e-07 gi|189234857|ref|XP_001812163.1| PREDICTED: simila ( 208) 256 60.8 3.2e-07 gi|157069986|gb|EAA29590.2| phenylalanyl-tRNA synt ( 643) 261 62.3 3.7e-07 >>gi|74750895|sp|Q8N1G4.1|LRC47_HUMAN RecName: Full=Leuc (583 aa) initn: 2605 init1: 2605 opt: 2605 Z-score: 2832.9 bits: 533.6 E(): 4.3e-149 Smith-Waterman score: 2605; 100.000% identity (100.000% similar) in 403 aa overlap (1-403:181-583) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|747 CAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR 280 290 300 310 320 330 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC 340 350 360 370 380 390 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC 400 410 420 430 440 450 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT 460 470 480 490 500 510 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA 520 530 540 550 560 570 400 KIAA11 DLATAPPHVTVVR ::::::::::::: gi|747 DLATAPPHVTVVR 580 >>gi|194208126|ref|XP_001915393.1| PREDICTED: leucine ri (518 aa) initn: 2250 init1: 1561 opt: 2215 Z-score: 2409.7 bits: 455.1 E(): 1.6e-125 Smith-Waterman score: 2215; 84.653% identity (94.802% similar) in 404 aa overlap (1-403:116-518) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|194 CAPRLQTLNLTGNCLDSFPAALFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 90 100 110 120 130 140 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG :::::::::::::::::::::::::::.:.::::::::::::::::::::::::::.::: gi|194 NNQLSEIPAELADCPKLKEINFRGNKLKDRRLEKMVSGCQTRSILEYLRVGGRGGGRGKG 150 160 170 180 190 200 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR .::: ::::.::.::::: ..:.:.. :.:. :::::::::::::.:.::::::::::: gi|194 KAEGPEKEEGRRRRRERK-KKESGEAGEEDADGAGRLLLRVLHVSESPAPLTVRVSPEVR 210 220 230 240 250 260 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC ::::..::::::::::. :.::::::::::::::::::::::::.:::.: ::.::::: gi|194 DVRPFLVGAVVRGMDLHAGSALKRFLTSQTKLHEDLCEKRTAATIATHDLSAVRGPLLYT 270 280 290 300 310 320 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC .::::::::.::::.:.:::.:::::: ::::.:::::::.:::::::::::::.::::: gi|194 TRPPQDLKIIPLGRREVKAKDLVRQLQQEAEEHRKQKKRQNVSGLHRYLHLLDGKENYPC 330 340 350 360 370 380 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT :::::::::::::::::::::.::::::::::::::::::::::.::::::::::..::: gi|194 LVDADGDVISFPPITNSEKTKIKKTTSDLFLEVTSATSLQICKDIMDALILKMAELNKYT 390 400 410 420 430 440 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::::::::::::::.:::: : :. .: ::. : :::::::::: :: ::::::::. gi|194 LENKEEGSLSDTEADAISGQLAAPRTSSQAEKDAHSPLVVEQVRVVDEEGRLKVVYPSKT 450 460 470 480 490 500 400 KIAA11 DLAT-APPHVTVVR ::.: : ::::.: gi|194 DLGTVAASHVTVIR 510 >>gi|149024755|gb|EDL81252.1| leucine rich repeat contai (558 aa) initn: 1867 init1: 1330 opt: 2190 Z-score: 2382.1 bits: 450.1 E(): 5.5e-124 Smith-Waterman score: 2190; 83.871% identity (94.789% similar) in 403 aa overlap (1-403:160-558) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|149 CAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 130 140 150 160 170 180 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|149 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 190 200 210 220 230 240 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : ::::::. :.:.:.::::::.:.:::. :.:..::.:.::::::::.::::::::::: gi|149 RQEGSEKED-RKKKRDRKQRRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEVR 250 260 270 280 290 300 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC ::::::::::::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|149 DVRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 310 320 330 340 350 360 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 370 380 390 400 410 420 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:.:: ..:::::::::::.:::.::.:.:::::..: : gi|149 LVDAEGDVISFPPITNSEKTKIKRTTCSVFLEVTSATSLQLCKDIMDSLVLKMAELNKST 430 440 450 460 470 480 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::.:: : : ::. :: ::::: ::::::::::::::::::::::: gi|149 SENKEEDMLSGTETDASHG-LSDPNLNPRAGKDGQCPLVVEQVRVVDLEGSLKVVYPSKA 490 500 510 520 530 540 400 KIAA11 DLATAPPHVTVVR ::.: ::.::::: gi|149 DLVTLPPYVTVVR 550 >>gi|208609970|ref|NP_001129138.1| leucine rich repeat c (580 aa) initn: 1867 init1: 1330 opt: 2190 Z-score: 2381.9 bits: 450.1 E(): 5.7e-124 Smith-Waterman score: 2190; 83.871% identity (94.789% similar) in 403 aa overlap (1-403:182-580) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|208 CAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|208 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : ::::::. :.:.:.::::::.:.:::. :.:..::.:.::::::::.::::::::::: gi|208 RQEGSEKED-RKKKRDRKQRRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEVR 280 290 300 310 320 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC ::::::::::::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|208 DVRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 330 340 350 360 370 380 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|208 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 390 400 410 420 430 440 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:.:: ..:::::::::::.:::.::.:.:::::..: : gi|208 LVDAEGDVISFPPITNSEKTKIKRTTCSVFLEVTSATSLQLCKDIMDSLVLKMAELNKST 450 460 470 480 490 500 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::.:: : : ::. :: ::::: ::::::::::::::::::::::: gi|208 SENKEEDMLSGTETDASHG-LSDPNLNPRAGKDGQCPLVVEQVRVVDLEGSLKVVYPSKA 510 520 530 540 550 560 400 KIAA11 DLATAPPHVTVVR ::.: ::.::::: gi|208 DLVTLPPYVTVVR 570 580 >>gi|73956691|ref|XP_546742.2| PREDICTED: similar to Y54 (589 aa) initn: 2243 init1: 1599 opt: 2190 Z-score: 2381.8 bits: 450.2 E(): 5.7e-124 Smith-Waterman score: 2190; 81.886% identity (94.541% similar) in 403 aa overlap (1-403:188-589) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::.:::.:::::::: gi|739 CAPRLQTLNLTGNRLDSFPAALFRPGALPLLSELAAADNCLRELSPDVAHLTSLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::::.::::::::::::.::::::: :.:::::: ::::.::::::: ::::::.::: gi|739 NNQLSEVPAELADCPKLKEVNFRGNKLTDRRLEKMVHGCQTKSILEYLRSGGRGGGRGKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR :..: ::::.::.::::. :::.:.:::..::...:::::::::::::.::::.:. :. gi|739 RTDGPEKEEARRRRRERR-RRESGEGEEEEVGSTSRLLLRVLHVSENPTPLTVHVNAAVK 280 290 300 310 320 330 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC ::::.:::::::::::: ::::.::::::::::::.::::::::.:::.::::.:::.: gi|739 DVRPFIVGAVVRGMDLQAGNALRRFLTSQTKLHEDICEKRTAATIATHDLRAVRGPLVYT 340 350 360 370 380 390 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::::::::::::::.:::.:::::::::::.:::::::.:::::::::::::.::::: gi|739 ARPPQDLKIVPLGRKEVKAKDLVRQLQLEAEEHRKQKKRQNVSGLHRYLHLLDGKENYPC 400 410 420 430 440 450 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT :::::::::::::::::::::.:::::::::::::::::: ::..::::.:::::..::: gi|739 LVDADGDVISFPPITNSEKTKIKKTTSDLFLEVTSATSLQTCKEIMDALVLKMAEINKYT 460 470 480 490 500 510 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA :::::.::::: ::::::: :.:.::: ::: . ::::::::.: .: :.::::::. gi|739 LENKEDGSLSDPEADAVSGPPLGPSTSPSAEKDGSAPLVVEQVRVLDEDGHLRVVYPSKT 520 530 540 550 560 570 400 KIAA11 DLATAPPHVTVVR ::. : :::::.: gi|739 DLGCAAPHVTVIR 580 >>gi|81908912|sp|Q505F5.1|LRC47_MOUSE RecName: Full=Leuc (581 aa) initn: 1693 init1: 1333 opt: 2171 Z-score: 2361.3 bits: 446.3 E(): 8e-123 Smith-Waterman score: 2171; 83.623% identity (94.541% similar) in 403 aa overlap (1-403:183-581) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|819 CAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|819 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : :.::::. :.:::::::.::.:.:::. :.:..::.:.::::::::.::::::::::. gi|819 RQEASEKED-RKKRRERKQHRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEVK 280 290 300 310 320 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC :::::::::.::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|819 DVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 330 340 350 360 370 380 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|819 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 390 400 410 420 430 440 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:::: .::::::::::::.:::.::.:::.:::..: : gi|819 LVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAELSKST 450 460 470 480 490 500 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::::: : : ::. . :.:::: ::::::::::::::::::::::. gi|819 SENKEEDMLSGTEADAGCG-LSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKT 510 520 530 540 550 560 400 KIAA11 DLATAPPHVTVVR :: : :::::::: gi|819 DLITLPPHVTVVR 570 580 >>gi|148683005|gb|EDL14952.1| leucine rich repeat contai (464 aa) initn: 1624 init1: 1329 opt: 2167 Z-score: 2358.2 bits: 445.4 E(): 1.2e-122 Smith-Waterman score: 2167; 83.375% identity (94.541% similar) in 403 aa overlap (1-403:66-464) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|148 CAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 40 50 60 70 80 90 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|148 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 100 110 120 130 140 150 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : :.::::. :.:::::::.::.:.:::. :.:..::.:.::::::::.::::::::::. gi|148 RQEASEKED-RKKRRERKQHRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEVK 160 170 180 190 200 210 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC :::::::::.::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|148 DVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 220 230 240 250 260 270 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|148 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 280 290 300 310 320 330 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:::: .:::::::::.::.:::.::.:::.:::..: : gi|148 LVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKST 340 350 360 370 380 390 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::::: : : ::. . :.:::: ::::::::::::::::::::::. gi|148 SENKEEDMLSGTEADAGCG-LSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKT 400 410 420 430 440 450 400 KIAA11 DLATAPPHVTVVR :: : :::::::: gi|148 DLITLPPHVTVVR 460 >>gi|149253441|ref|XP_001475204.1| PREDICTED: similar to (580 aa) initn: 1624 init1: 1329 opt: 2167 Z-score: 2356.9 bits: 445.5 E(): 1.4e-122 Smith-Waterman score: 2167; 83.375% identity (94.541% similar) in 403 aa overlap (1-403:182-580) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|149 CAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|149 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : :.::::. :.:::::::.::.:.:::. :.:..::.:.::::::::.::::::::::. gi|149 RQEASEKED-RKKRRERKQHRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEVK 280 290 300 310 320 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC :::::::::.::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|149 DVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 330 340 350 360 370 380 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 390 400 410 420 430 440 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:::: .:::::::::.::.:::.::.:::.:::..: : gi|149 LVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKST 450 460 470 480 490 500 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::::: : : ::. . :.:::: ::::::::::::::::::::::. gi|149 SENKEEDMLSGTEADAGCG-LSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKT 510 520 530 540 550 560 400 KIAA11 DLATAPPHVTVVR :: : :::::::: gi|149 DLITLPPHVTVVR 570 580 >>gi|74191931|dbj|BAE32909.1| unnamed protein product [M (581 aa) initn: 1685 init1: 1325 opt: 2163 Z-score: 2352.6 bits: 444.7 E(): 2.5e-122 Smith-Waterman score: 2163; 83.375% identity (94.541% similar) in 403 aa overlap (1-403:183-581) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|741 CAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: ..:: gi|741 NNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RSKG 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR : :.::::. :.:::::::.::.:.:::. :.:..::.:.::.:::::.::::::::::. gi|741 RQEASEKED-RKKRRERKQHRESGEGEEE-VADSARLMLKVLYVSENPTPLTVRVSPEVK 280 290 300 310 320 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC :::::::::.::::::::::::.:::.::::::.::::::::::.:::.:.::.::::: gi|741 DVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYA 330 340 350 360 370 380 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|741 ARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPC 390 400 410 420 430 440 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT ::::.::::::::::::::::.:::: .::::::::::::.:::.::.:::.:::..: : gi|741 LVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAELSKST 450 460 470 480 490 500 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA ::::: :: ::::: : : ::. . :.:::: ::::::::::::::::::::::. gi|741 SENKEEDMLSGTEADAGCG-LSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKT 510 520 530 540 550 560 400 KIAA11 DLATAPPHVTVVR :: : :::::::: gi|741 DLITLPPHVTVVR 570 580 >>gi|151557045|gb|AAI50060.1| LRRC47 protein [Bos taurus (581 aa) initn: 2093 init1: 1517 opt: 2099 Z-score: 2283.0 bits: 431.8 E(): 1.8e-118 Smith-Waterman score: 2099; 80.893% identity (92.308% similar) in 403 aa overlap (1-403:182-581) 10 20 30 KIAA11 LSELAAADNCLRELSPDIAHLASLKTLDLS :::::::::::::::::::::::::::::: gi|151 CAPRLQTLNLTGNRLDAFPAALFLPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLS 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 NNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKG ::::::::::::::::::.::::::.:::::::::::::::::::::::.:::: . .: gi|151 NNQLSEIPAELADCPKLKDINFRGNRLRDKRLEKMVSGCQTRSILEYLRAGGRG--RCRG 220 230 240 250 260 100 110 120 130 140 150 KIAA11 RAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVR .::: .:::.:::::::: .::.:.: . : .:.::::::::::::: ::::.::::: gi|151 KAEGPDKEEGRRKRRERK-KRESGEGADAVVDEASRLLLRVLHVSENPFLLTVRASPEVR 270 280 290 300 310 320 160 170 180 190 200 210 KIAA11 DVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYC ::::..::::::::::.:::::::::. :::::::::::::.::.:::.: ::.::::: gi|151 DVRPFFVGAVVRGMDLRPGNALKRFLSCQTKLHEDLCEKRTVATIATHDLGAVRGPLLYA 330 340 350 360 370 380 220 230 240 250 260 270 KIAA11 ARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPC ::::::.::.::::.:.:::.:::::::::::.:::::::.:::::::::::::.:.::: gi|151 ARPPQDFKIIPLGRREVKAKDLVRQLQLEAEEHRKQKKRQNVSGLHRYLHLLDGKEHYPC 390 400 410 420 430 440 280 290 300 310 320 330 KIAA11 LVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYT :::::::::::::::::::::.::::::::::::::.:::::::.::::::::::..::: gi|151 LVDADGDVISFPPITNSEKTKIKKTTSDLFLEVTSAASLQICKDIMDALILKMAEINKYT 450 460 470 480 490 500 340 350 360 370 380 390 KIAA11 LENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKA :::.::.:::: :.::: :. :: ..:.: : . :::::::::: :: :::::::: gi|151 LENREESSLSDPESDAVCGHGLDPKATPGAEVTGSTPLVVEQVRVVDEEGHLKVVYPSKM 510 520 530 540 550 560 400 KIAA11 DLATAPPHVTVVR :: : ::::.: gi|151 DLDFAAAHVTVLR 570 580 403 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 01:19:13 2009 done: Wed Mar 4 01:24:07 2009 Total Scan time: 1508.710 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]